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UniProtKB/Swiss-Prot entry Q9X1P5

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_THEMA
Primary accession number Q9X1P5
Secondary accession numbers None
Integrated into Swiss-Prot on May 30, 2000
Sequence was last modified on November 1, 1999 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 66)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: TM_1559
From
Thermotoga maritima [TaxID: 2336] [HAMAP proteome]
Taxonomy Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 43589 / MSB8 / DSM 3109 / JCM 10099;
DOI=10.1038/20601; PubMed=10360571 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A., Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M., Cotton M.D., Pratt M.S., Phillips C.A., Richardson D.L., Heidelberg J.F., Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L., Smith H.O., Venter J.C., Fraser C.M.;
"Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima.";
Nature 399:323-329(1999).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE000512; AAD36625.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B72240; B72240.
RefSeq NP_229359.1; -.
3D structure databases
PDB
1O0Y; X-ray; 1.90 A; A/B=1-248.[ExPASy / RCSB / EBI]
PDBsum 1O0Y; -.
ModBase Q9X1P5.
Enzyme and pathway databases
BioCyc TMAR243274:TM_1559-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
BLOCKS Q9X1P5.
Genome annotation databases
GeneID 897566; -.
GenomeReviews AE000512_GR; TM_1559.
KEGG tma:TM1559; -.
NMPDR fig|243274.1.peg.1543; -.
TIGR TM_1559; -.
Phylogenomic databases
HOGENOM Q9X1P5; -.
Other
ProtoNet Q9X1P5.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   248  248     Deoxyribose-phosphate aldolase. PRO_0000057280
ACT_SITE   179   179        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   208   208        By similarity. 
HELIX   1    16  16      
STRAND   22    24  3      
HELIX   28    34  7      
STRAND   35    39  5      
HELIX   46    59  14      
STRAND   62    66  5      
HELIX   68    70  3      
HELIX   71    78  8      
STRAND   84    90  7      
TURN   91    93  3      
HELIX   98   111  14      
STRAND   114   119  6      
HELIX   122   126  5      
HELIX   130   143  14      
TURN   144   146  3      
STRAND   147   152  6      
HELIX   155   157  3      
HELIX   160   172  13      
STRAND   176   179  4      
STRAND   183   186  4      
HELIX   191   201  11      
STRAND   205   212  8      
HELIX   216   224  9      
STRAND   228   233  6      
HELIX   235   245  11      
Sequence information
Length: 248 AA [This is the length of the unprocessed precursor] Molecular weight: 27285 Da [This is the MW of the unprocessed precursor] CRC64: 7236D2ECA2CA1951 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MIEYRIEEAV AKYREFYEFK PVRESAGIED VKSAIEHTNL KPFATPDDIK KLCLEARENR 

        70         80         90        100        110        120 
FHGVCVNPCY VKLAREELEG TDVKVVTVVG FPLGANETRT KAHEAIFAVE SGADEIDMVI 

       130        140        150        160        170        180 
NVGMLKAKEW EYVYEDIRSV VESVKGKVVK VIIETCYLDT EEKIAACVIS KLAGAHFVKT 

       190        200        210        220        230        240 
STGFGTGGAT AEDVHLMKWI VGDEMGVKAS GGIRTFEDAV KMIMYGADRI GTSSGVKIVQ 


GGEERYGG
Q9X1P5 in FASTA format

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