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UniProtKB/Swiss-Prot entry Q9BXJ2


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name C1QT7_HUMAN
Primary accession number Q9BXJ2
Secondary accession number B2RBT3
Integrated into Swiss-Prot on April 16, 2002
Sequence was last modified on June 1, 2001 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 60)
Name and origin of the protein
Protein name Complement C1q tumor necrosis factor-related protein 7 [Precursor]
Synonyms None
Gene name
Name: C1QTNF7
Synonyms: CTRP7
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
Piddington C.S., Sheppard P.O., Bishop P., Lasser G.W.;
"Homo sapiens complement-c1q tumor necrosis factor-related protein.";
Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Trachea;
DOI=10.1038/ng1285; PubMed=14702039 [NCBI, ExPASy, EBI, Israel, Japan]
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S., Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Testis;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF329839; AAK17963.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AK314802; BAG37330.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC022187; AAH22187.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC024015; AAH24015.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001128643.1; -.
NP_114117.1; -.
UniGene Hs.153714
3D structure databases
HSSP Q60994; 1C28. [HSSP ENTRY / PDB]
ModBase Q9BXJ2.
PTM databases
PhosphoSite Q9BXJ2; -.
Organism-specific databases
GeneCards GC04P015017; -.
HGNC HGNC:14342; C1QTNF7.
GenAtlas C1QTNF7.
HPA CAB007055; -.
PharmGKB PA25634; -.
GeneCards Q9BXJ2.
Gene expression databases
ArrayExpress Q9BXJ2; -.
CleanEx HS_C1QTNF7; -.
GermOnline ENSG00000163145; Homo sapiens.
Family and domain databases
InterPro IPR001073; C1q.
IPR008160; Collagen.
IPR008983; Tumour_necrosis_fac-like.
Graphical view of domain structure.
Gene3D G3DSA:2.60.120.40; Tumour_necrosis_fac-like; 1.
Pfam PF00386; C1q; 1.
PF01391; Collagen; 2.
Pfam graphical view of domain structure.
PRINTS PR00007; COMPLEMNTC1Q.
SMART SM00110; C1Q; 1.
SMART graphical view of domain structure.
PROSITE PS50871; C1Q; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSG00000163145; Homo sapiens. [Contig view]
GeneID 114905; -.
KEGG hsa:114905; -.
Phylogenomic databases
HOGENOM Q9BXJ2; -.
HOVERGEN Q9BXJ2; -.
Other
NextBio 79426; -.
ProtoNet Q9BXJ2.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Collagen; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
SIGNAL   1    16  16     Potential. 
CHAIN   17   289  273     Complement C1q tumor necrosis factor-related protein 7. PRO_0000003539
DOMAIN   38   139  102     Collagen-like. 
DOMAIN   143   279  137     C1q. 
Sequence information
Length: 289 AA [This is the length of the unprocessed precursor] Molecular weight: 30683 Da [This is the MW of the unprocessed precursor] CRC64: A61609FF86D26946 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MFVLLYVTSF AICASGQPRG NQLKGENYSP RYICSIPGLP GPPGPPGANG SPGPHGRIGL 

        70         80         90        100        110        120 
PGRDGRDGRK GEKGEKGTAG LRGKTGPLGL AGEKGDQGET GKKGPIGPEG EKGEVGPIGP 

       130        140        150        160        170        180 
PGPKGDRGEQ GDPGLPGVCR CGSIVLKSAF SVGITTSYPE ERLPIIFNKV LFNEGEHYNP 

       190        200        210        220        230        240 
ATGKFICAFP GIYYFSYDIT LANKHLAIGL VHNGQYRIKT FDANTGNHDV ASGSTVIYLQ 

       250        260        270        280 
PEDEVWLEIF FTDQNGLFSD PGWADSLFSG FLLYVDTDYL DSISEDDEL 

Q9BXJ2 in FASTA format

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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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