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UniProtKB/Swiss-Prot entry Q8Z1Q9

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name NRFA_SALTI
Primary accession number Q8Z1Q9
Secondary accession numbers None
Integrated into Swiss-Prot on October 19, 2002
Sequence was last modified on March 1, 2002 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 61)
Name and origin of the protein
Protein name Cytochrome c-552 [Precursor]
Synonyms EC 1.7.2.2
Ammonia-forming cytochrome c nitrite reductase
Cytochrome c nitrite reductase
Gene name
Name: nrfA
OrderedLocusNames: STY4475, t4183
From
Salmonella typhi [TaxID: 601] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CT18;
DOI=10.1038/35101607; PubMed=11677608 [NCBI, ExPASy, EBI, Israel, Japan]
Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J., Churcher C.M., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M., Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A., Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T., Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A., Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M.A., Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S., Barrell B.G.;
"Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18.";
Nature 413:848-852(2001).
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 700931 / Ty2;
DOI=10.1128/JB.185.7.2330-2337.2003; PubMed=12644504 [NCBI, ExPASy, EBI, Israel, Japan]
Deng W., Liou S.-R., Plunkett G. III, Mayhew G.F., Rose D.J., Burland V., Kodoyianni V., Schwartz D.C., Blattner F.R.;
"Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18.";
J. Bacteriol. 185:2330-2337(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AL627282; CAD09261.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AE014613; AAO71647.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_458575.1; -.
NP_807787.1; -.
3D structure databases
HSSP P32050; 1GU6. [HSSP ENTRY / PDB]
SMR Q8Z1Q9; 38-478.
ModBase Q8Z1Q9.
Enzyme and pathway databases
BioCyc SENT209261:T4183-MON; -.
SENT220341:STY4475-MON; -.
Ontologies
GO
GO:0042597; Cellular component: periplasmic space (inferred from electronic annotation from HAMAP).
GO:0005509; Molecular function: calcium ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0042279; Molecular function: nitrite reductase (cytochrome, ammonia-forming) activity (inferred from electronic annotation from HAMAP).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006807; Biological process: nitrogen compound metabolic process (inferred from electronic annotation from HAMAP).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01182; -; 1.
PBIL [Tree]
InterPro IPR003321; Cyt_c552.
IPR017570; Cytc_552_NO2Rdtase_formate-dep.
IPR011031; Multihaem_cyt.
Graphical view of domain structure.
Pfam PF02335; Cytochrom_C552; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000243; Cyt_c552; 1.
PROSITE PS51008; MULTIHEME_CYTC; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet Q8Z1Q9.
Genome annotation databases
GeneID 1069632; -.
1250690; -.
GenomeReviews AL513382_GR; STY4475.
AE014613_GR; t4183.
KEGG stt:t4183; -.
sty:STY4475; -.
Phylogenomic databases
HOGENOM Q8Z1Q9; -.
Genome annotation databases
CMR Q8Z1Q9; STY4475.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Calcium; Complete proteome; Electron transport; Heme; Iron; Metal-binding; Oxidoreductase; Periplasm; Signal; Transport.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
SIGNAL   1    26  26     By similarity. 
CHAIN   27   478  452     Cytochrome c-552. PRO_0000006581
METAL   94    94        Iron (heme 3 axial ligand) (By similarity). 
METAL   126   126        Iron (heme 1 axial ligand) (By similarity). 
METAL   164   164        Iron (heme 2 axial ligand) (By similarity). 
METAL   213   213        Iron (heme 3 axial ligand) (By similarity). 
METAL   215   215        Calcium (By similarity). 
METAL   216   216        Calcium; via carbonyl oxygen (By similarity). 
METAL   261   261        Calcium; via carbonyl oxygen (By similarity). 
METAL   263   263        Calcium (By similarity). 
METAL   275   275        Iron (heme 5 axial ligand) (By similarity). 
METAL   286   286        Iron (heme 4 axial ligand) (By similarity). 
METAL   301   301        Iron (heme 2 axial ligand) (By similarity). 
METAL   318   318        Iron (heme 5 axial ligand) (By similarity). 
METAL   393   393        Iron (heme 4 axial ligand) (By similarity). 
BINDING   122   122        Heme 1 (covalent) (By similarity). 
BINDING   125   125        Heme 1 (covalent) (By similarity). 
BINDING   160   160        Heme 2 (covalent) (By similarity). 
BINDING   163   163        Heme 2 (covalent) (By similarity). 
BINDING   209   209        Heme 3 (covalent) (By similarity). 
BINDING   212   212        Heme 3 (covalent) (By similarity). 
BINDING   216   216        Substrate (By similarity). 
BINDING   264   264        Substrate (By similarity). 
BINDING   282   282        Heme 4 (covalent) (By similarity). 
BINDING   285   285        Heme 4 (covalent) (By similarity). 
BINDING   314   314        Heme 5 (covalent) (By similarity). 
BINDING   317   317        Heme 5 (covalent) (By similarity). 
Sequence information
Length: 478 AA [This is the length of the unprocessed precursor] Molecular weight: 53727 Da [This is the MW of the unprocessed precursor] CRC64: 9190792F7300CE88 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MARKTLRARR FFSLIFPFFF ITSVYAEQTP VSAKTVTVEA KNETFAPQHP DQYQSWKATS 

        70         80         90        100        110        120 
EQSAREDALA EDPRLVILWA GYPFSRDYNK PRGHAYAVTD VRETLRTGAP KTAEDGPLPM 

       130        140        150        160        170        180 
ACWSCKSPDV ARLIQQEGED GYFHGKWARG GPEIVNDLGC ADCHNTASDD FAQGKPAITL 

       190        200        210        220        230        240 
SRPYAERAME AIGKPFDKAG RFDQQSMVCG QCHVEYYFDG KNKAVKFPWD EGMKVENMEQ 

       250        260        270        280        290        300 
YYDAIAFSDW TNSLSKTPML KAQHPEYETW SAGIHGKNNV TCIDCHMPKV QNAEGKLYTD 

       310        320        330        340        350        360 
HKIGNPFDNF AQTCANCHTQ DKASLQKVVA ERKQAIHDLK IKVEDQLVHA HFEAKAAWDA 

       370        380        390        400        410        420 
GATDAEMKPI LNDIRHAQWR WDLAIASHGI HMHAPEEGLR MLGSAMDKAA DARTKLARLL 

       430        440        450        460        470 
ATKGITHEIP LPDISTKEKA QKAIGLNMQQ INAEKQDFLK TVVPQWEDQA RKNGLLSQ
Q8Z1Q9 in FASTA format

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