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UniProtKB/Swiss-Prot entry Q8NTC4

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_CORGL
Primary accession number Q8NTC4
Secondary accession numbers None
Integrated into Swiss-Prot on November 1, 2002
Sequence was last modified on October 1, 2002 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 44)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: Cgl0383, cg0458
From
Corynebacterium glutamicum (Brevibacterium flavum) [TaxID: 1718] [HAMAP proteome]
Taxonomy Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025;
Nakagawa S.;
"Complete genomic sequence of Corynebacterium glutamicum ATCC 13032.";
Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
[2]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025;
DOI=10.1016/S0168-1656(03)00154-8; PubMed=12948626 [NCBI, ExPASy, EBI, Israel, Japan]
Kalinowski J., Bathe B., Bartels D., Bischoff N., Bott M., Burkovski A., Dusch N., Eggeling L., Eikmanns B.J., Gaigalat L., Goesmann A., Hartmann M., Huthmacher K., Kraemer R., Linke B., McHardy A.C., Meyer F., Moeckel B., Pfefferle W., Puehler A., Rey D.A., Rueckert C., Rupp O., Sahm H., Wendisch V.F., Wiegraebe I., Tauch A.;
"The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.";
J. Biotechnol. 104:5-25(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000036; BAB97776.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BX927149; CAF19098.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_599631.1; -.
YP_224684.1; -.
3D structure databases
HSSP O66540; 1MZH. [HSSP ENTRY / PDB]
ModBase Q8NTC4.
Enzyme and pathway databases
BioCyc CGLU196627-1:CG0458-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
GO:0009264; Biological process: deoxyribonucleotide catabolic process (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
Genome annotation databases
GeneID 1021418; -.
3344707; -.
GenomeReviews BA000036_GR; Cgl0383.
BX927147_GR; cg0458.
KEGG cgb:cg0458; -.
cgl:NCgl0372; -.
Phylogenomic databases
HOGENOM Q8NTC4; -.
Genome annotation databases
CMR Q8NTC4; Cgl0383.
Other
ProtoNet Q8NTC4.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   222  222     Deoxyribose-phosphate aldolase. PRO_0000057230
ACT_SITE   156   156        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   186   186        By similarity. 
Sequence information
Length: 222 AA [This is the length of the unprocessed precursor] Molecular weight: 22520 Da [This is the MW of the unprocessed precursor] CRC64: 563C3D6B6805DD08 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MTISRSTMAQ ILDYTLLGPE VTNSELAAFI DSAIELGVGT ICVPNSMVNL TAKAQEAGIR 

        70         80         90        100        110        120 
VATVAGFPHG KTPALVKAAE ARLAVQSGAS EVDVVLDIAV VKEGDANRLL QEIVAIREAV 

       130        140        150        160        170        180 
PSPVVLKFIL ETAVVSDEAI VTAVNALIAA GADFAKTSTG FHPAGGATVE AVRVMASASR 

       190        200        210        220 
GRVGIKAAGG VKTWEDAVAF VEAGATRIGT SNAGAILEGA PE
Q8NTC4 in FASTA format

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