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UniProtKB/Swiss-Prot entry Q8K479

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name C1QT5_MOUSE
Primary accession number Q8K479
Secondary accession numbers None
Integrated into Swiss-Prot on April 26, 2005
Sequence was last modified on October 1, 2002 (Sequence version 1)
Annotations were last modified on    December 16, 2008 (Entry version 34)
Name and origin of the protein
Protein name Complement C1q tumor necrosis factor-related protein 5 [Precursor]
Synonyms None
Gene name
Name: C1qtnf5
Synonyms: Ctrp5
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 2: Evidence at transcript level;
References
[1]
 NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=C57BL/6J;
DOI=10.1093/hmg/11.16.1879; PubMed=12140190 [NCBI, ExPASy, EBI, Israel, Japan]
Kameya S., Hawes N.L., Chang B., Heckenlively J.R., Naggert J.K., Nishina P.M.;
"Mfrp, a gene encoding a frizzled related protein, is mutated in the mouse retinal degeneration 6.";
Hum. Mol. Genet. 11:1879-1886(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AF469650; AAM89217.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_001035721.1; -.
NP_001035722.1; -.
NP_663588.2; -.
UniGene Mm.227110
3D structure databases
HSSP Q03692; 1GR3. [HSSP ENTRY / PDB]
ModBase Q8K479.
Organism-specific databases
MGI MGI:2385958; C1qtnf5.
Ontologies
GO
GO:0005576; Cellular component: extracellular region (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR001073; C1q.
IPR008160; Collagen.
IPR008983; Tumour_necrosis_fac-like.
Graphical view of domain structure.
Gene3D G3DSA:2.60.120.40; Tumour_necrosis_fac-like; 1.
Pfam PF00386; C1q; 1.
PF01391; Collagen; 1.
Pfam graphical view of domain structure.
PRINTS PR00007; COMPLEMNTC1Q.
SMART SM00110; C1Q; 1.
SMART graphical view of domain structure.
PROSITE PS50871; C1Q; 1.
PROSITE graphical view of domain structure (profiles).
Genome annotation databases
Ensembl ENSMUSG00000079592; Mus musculus. [Contig view]
GeneID 235312; -.
KEGG mmu:235312; -.
Phylogenomic databases
HOVERGEN Q8K479; -.
Other
NextBio 382581; -.
SOURCE C1qtnf5; Mus musculus.
ProtoNet Q8K479.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Collagen; Secreted; Signal.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom  To Length Description FTId
SIGNAL   1    15  15     By similarity. 
CHAIN   16   243  228     Complement C1q tumor necrosis factor-related protein 5. PRO_0000003536
DOMAIN   30    95  66     Collagen-like. 
DOMAIN   99   243  145     C1q. 
Sequence information
Length: 243 AA [This is the length of the unprocessed precursor] Molecular weight: 25437 Da [This is the MW of the unprocessed precursor] CRC64: 9F4D5804349791D9 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MRPLLALLLL GLVSGSPPLD DNKIPSLCPG QPGLPGTPGH HGSQGLPGRD GRDGRDGAPG 

        70         80         90        100        110        120 
APGEKGEGGR PGLPGPRGEP GPRGEAGPMG AIGPAGECSV PPRSAFSAKR SESRVPPPAD 

       130        140        150        160        170        180 
TPLPFDRVLL NEQGHYDPTT GKFTCQVPGV YYFAVHATVY RASLQFDLVK NGQSIASFFQ 

       190        200        210        220        230        240 
YFGGWPKPAS LSGGAMVRLE PEDQVWVQVG VGDYIGIYAS IKTDSTFSGF LVYSDWHSSP 


VFA
Q8K479 in FASTA format

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