NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=DSM 14371 / JCM 11309 / KCTC 3954 / HTE831;
DOI=10.1093/nar/gkf526; PubMed=12235376 [NCBI, ExPASy, EBI, Israel, Japan]
Takami H., Takaki Y., Uchiyama I.;
"Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments.";
Nucleic Acids Res. 30:3927-3935(2002).

Comments

CATALYTIC ACTIVITY: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.
PATHWAY: Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose 1-phosphate: step 2/2 .
SUBCELLULAR LOCATION: Cytoplasm (By similarity).
SIMILARITY: Belongs to the deoC/fbaB aldolase family. DeoC type 1 subfamily.

Copyright

Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.

Cross-references

Sequence databases

EMBL

BA000028; BAC13919.1; -; Genomic_DNA.

[EMBL / GenBank / DDBJ] [CoDingSequence]

RefSeq

NP_692884.1; -.

3D structure databases

HSSP

Q9X1P5; 1O0Y. [HSSP ENTRY / PDB]

ModBase

Q8EPW8.

Enzyme and pathway databases

BioCyc

OIHE221109:OB1963-MON; -.

Ontologies

GO:0005737;	Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139;	Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052;	Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
GO:0009264;	Biological process: deoxyribonucleotide catabolic process (inferred from electronic annotation from InterPro).
QuickGo view.

Family and domain databases

HAMAP

MF_00114; -; 1.
PBIL [Tree]

InterPro

IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.

Gene3D

G3DSA:3.20.20.70; Aldolase_TIM; 1.

PANTHER

PTHR10889; DeoC; 1.

Pfam

PF01791; DeoC; 1.
Pfam graphical view of domain structure.

PIRSF

PIRSF001357; DeoC; 1.

TIGRFAMs

TIGR00126; deoC; 1.

Genome annotation databases

1018440; -.

BA000028_GR; OB1963.

oih:OB1963; -.

fig|221109.1.peg.1963; -.

Phylogenomic databases

HOGENOM

Q8EPW8; -.

Genome annotation databases

CMR

Q8EPW8; OB1963.

Other

ProtoNet

Q8EPW8.

UniRef

View cluster of proteins with at least 50% / 90% / 100% identity.

Keywords

Complete proteome; Cytoplasm; Lyase; Schiff base.

Features

Feature table viewer

`Key`	`From To`	`Length`	`Description`	`FTId`
`CHAIN`	`1 221`	`221`	`Deoxyribose-phosphate aldolase 1.`	`PRO_0000057250`
`ACT_SITE`	`152 152`		`Schiff-base intermediate with acetaldehyde (By similarity).`
`ACT_SITE`	`181 181`		`By similarity.`

Sequence information

Length: 221 AA [This is the length of the unprocessed precursor]

Molecular weight: 23666 Da [This is the MW of the unprocessed precursor]

CRC64: 81E76D434976E093 [This is a checksum on the sequence]

        10         20         30         40         50         60 
MDLAKYIDHT QLKPDTTKQS IVKIVEEAKQ HEFASVCVNP HWVSYCYNEL KDTPVKVCTV 

        70         80         90        100        110        120 
IGFPLGATST ETKIFETNQA IADGATEVDM VINVGELKSN NDAFVEKDIR AVVEAAKGKA 

       130        140        150        160        170        180 
LTKVIIETSL LTEDEKVRAC KLAKNAEADY VKTSTGFSGG GATVEDIRLM RETVGPEMGV 

       190        200        210        220 
KASGGVRDLE QTEAMIEAGA TRIGASSGVA IVSGEQGTSD Y

Q8EPW8 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
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	BLAST submission on ExPASy/SIB or at NCBI (USA)		Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
	ScanProsite, MotifScan		Submit a homology modeling request to SWISS-MODEL
	NPSA Sequence analysis tools