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UniProtKB/Swiss-Prot entry Q892U4

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_CLOTE
Primary accession number Q892U4
Secondary accession numbers None
Integrated into Swiss-Prot on April 26, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 38)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: CTC_01994
From
Clostridium tetani [TaxID: 1513] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Massachusetts / E88;
DOI=10.1073/pnas.0335853100; PubMed=12552129 [NCBI, ExPASy, EBI, Israel, Japan]
Brueggemann H., Baeumer S., Fricke W.F., Wiezer A., Liesegang H., Decker I., Herzberg C., Martinez-Arias R., Merkl R., Henne A., Gottschalk G.;
"The genome sequence of Clostridium tetani, the causative agent of tetanus disease.";
Proc. Natl. Acad. Sci. U.S.A. 100:1316-1321(2003).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015927; AAO36500.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_782563.1; -.
3D structure databases
ModBase Q892U4.
Enzyme and pathway databases
BioCyc CTET212717:CTC_01994-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
BLOCKS Q892U4.
ProtoNet Q892U4.
Genome annotation databases
GeneID 1059162; -.
GenomeReviews AE015927_GR; CTC_01994.
KEGG ctc:CTC01994; -.
NMPDR fig|212717.1.peg.1785; -.
Phylogenomic databases
HOGENOM Q892U4; -.
Genome annotation databases
CMR Q892U4; CTC_01994.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   216  216     Deoxyribose-phosphate aldolase. PRO_0000057228
ACT_SITE   152   152        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   181   181        By similarity. 
Sequence information
Length: 216 AA [This is the length of the unprocessed precursor] Molecular weight: 23516 Da [This is the MW of the unprocessed precursor] CRC64: 57653EEFEA2C5003 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MEIQKFIDHT ILKPEATEEQ VKKLCKEARD YKFASVCVNP YYTSLVSKEL QGTDVKTCVV 

        70         80         90        100        110        120 
IGFPLGANTK EVKAFETKQA IENGAKEVDM VINIGALKDK KYDVVKEDIE AVVNEAKGKA 

       130        140        150        160        170        180 
LVKVIIETCL LTDEEKVKAC EISKEVGADF VKTSTGFSTG GAKKEDVKLM RETVGENIGV 

       190        200        210 
KASGGIRDYK TSLEMIEAGA NRIGASAGIK IVEESK
Q892U4 in FASTA format

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