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UniProtKB/Swiss-Prot entry Q88EM0


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DADA1_PSEPK
Primary accession number Q88EM0
Secondary accession numbers None
Integrated into Swiss-Prot on January 16, 2004
Sequence was last modified on June 1, 2003 (Sequence version 1)
Annotations were last modified on    November 4, 2008 (Entry version 35)
Name and origin of the protein
Protein name D-amino acid dehydrogenase 1 small subunit
Synonym EC 1.4.99.1
Gene name
Name: dadA1
Synonyms: dadA-1
OrderedLocusNames: PP_4434
From
Pseudomonas putida (strain KT2440) [TaxID: 160488] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
Protein existence 3: Inferred from homology;
References
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1046/j.1462-2920.2002.00366.x; PubMed=12534463 [NCBI, ExPASy, EBI, Israel, Japan]
Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O., Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M.;
"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.";
Environ. Microbiol. 4:799-808(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
AE015451; AAN70011.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_746547.1; -.
3D structure databases
ModBase Q88EM0.
Enzyme and pathway databases
BioCyc PPUT160488:PP_4434-MON; -.
Ontologies
GO
GO:0008718; Molecular function: D-amino-acid dehydrogenase activity (inferred from electronic annotation from HAMAP).
GO:0006524; Biological process: alanine catabolic process (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01202; -; 1.
PBIL [Tree]
InterPro IPR006076; FAD-dep_OxRdtase.
IPR003042; Rng_hydrolase.
Graphical view of domain structure.
Pfam PF01266; DAO; 1.
Pfam graphical view of domain structure.
PRINTS PR00420; RNGMNOXGNASE.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
BLOCKS Q88EM0.
ProtoNet Q88EM0.
Genome annotation databases
GeneID 1041878; -.
GenomeReviews AE015451_GR; PP_4434.
KEGG ppu:PP_4434; -.
NMPDR fig|160488.1.peg.4377; -.
TIGR PP_4434; -.
Phylogenomic databases
HOGENOM Q88EM0; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; FAD; Flavoprotein; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom To Length Description FTId
CHAIN   1   432  432     D-amino acid dehydrogenase 1 small subunit. PRO_0000166140
NP_BIND   3    17  15     FAD (Potential). 
Sequence information
Length: 432 AA [This is the length of the unprocessed precursor] Molecular weight: 47155 Da [This is the MW of the unprocessed precursor] CRC64: 4D1B8B220915C751 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MRVLILGSGV VGTVSAYYLA REGFEVVVVD RQDGPAMETS FANAGQVSPG YASPWSAPGV 

        70         80         90        100        110        120 
PLKAIRWMLQ QHAPLAIKPT SSLDQYRWMI QMLRNCNPAS YAVNKERMVR ISEYSRDCLD 

       130        140        150        160        170        180 
ELRAETGISY EARQLGTTQL FRTQAQVDNA AKDIAILKQS GVPFELLDRD GIAKAEPALA 

       190        200        210        220        230        240 
SVRDKLAGAL RLPNDQTGDC QMFTRKLAKM AEELGVEFRF GCNIDRLECS GDTISGVWID 

       250        260        270        280        290        300 
GKLEVADQYV LALGSYSPHM LKPLGIQAPI YPLKGYSLTI PITDASMAPS STILDETYKV 

       310        320        330        340        350        360 
AITRFDDRIR VGGMAEIAGF DLSLNARRRD TLELVVGDLY PKGGDLTKAT FWTGLRPATP 

       370        380        390        400        410        420 
DGTPIVGKTK YRNLFLNTGH GTLGWTMSCG SGRLLADLMA GKKPKISAKG LDISRYSNQK 

       430 
EAHNHGNPAT AL 

Q88EM0 in FASTA format

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