ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry Q6DB24

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name GHRB_ERWCT
Primary accession number Q6DB24
Secondary accession numbers None
Integrated into Swiss-Prot on September 2, 2008
Sequence was last modified on September 2, 2008 (Sequence version 2)
Annotations were last modified on    November 4, 2008 (Entry version 28)
Name and origin of the protein
Protein name Glyoxylate/hydroxypyruvate reductase B
Synonyms EC 1.1.1.79
EC 1.1.1.81
Gene name
Name: ghrB
OrderedLocusNames: ECA0078
From
Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) [TaxID: 29471] [HAMAP proteome]
Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SCRI 1043 / ATCC BAA-672;
DOI=10.1073/pnas.0402424101; PubMed=15263089 [NCBI, ExPASy, EBI, Israel, Japan]
Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Norbertczak H., Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K.;
"Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors.";
Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BX950851; CAG72998.1; ALT_INIT; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_048206.2; -.
3D structure databases
ModBase Q6DB24.
Enzyme and pathway databases
BioCyc ECAR218491:ECA0078-MON; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from UniProtKB-KW).
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from HAMAP).
GO:0030267; Molecular function: glyoxylate reductase (NADP) activity (inferred from electronic annotation from HAMAP).
GO:0016618; Molecular function: hydroxypyruvate reductase activity (inferred from electronic annotation from HAMAP).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
HAMAP MF_01667; -; 1.
PBIL [Tree]
InterPro IPR006139; D-isomer_2_OHA_DHase.
IPR006140; D-isomer_2_OHA_DHase_NAD-bd.
IPR016040; NAD(P)-bd.
Graphical view of domain structure.
Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 1.
Pfam PF00389; 2-Hacid_dh; 1.
PF02826; 2-Hacid_dh_C; 1.
Pfam graphical view of domain structure.
PROSITE PS00065; D_2_HYDROXYACID_DH_1; FALSE_NEG.
PS00670; D_2_HYDROXYACID_DH_2; FALSE_NEG.
PS00671; D_2_HYDROXYACID_DH_3; 1.
BLOCKS Q6DB24.
ProtoNet Q6DB24.
Genome annotation databases
GeneID 2884280; -.
GenomeReviews BX950851_GR; ECA0078.
KEGG eca:ECA0078; -.
NMPDR fig|218491.3.peg.3040; -.
Phylogenomic databases
HOGENOM Q6DB24; -.
Genome annotation databases
CMR Q6DB24; ECA0078.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; NAD; NADP; Oxidoreductase.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   320  320     Glyoxylate/hydroxypyruvate reductase B. PRO_0000348382
ACT_SITE   233   233        By similarity. 
ACT_SITE   262   262        By similarity. 
ACT_SITE   281   281        Proton donor (By similarity). 
Sequence information
Length: 320 AA [This is the length of the unprocessed precursor] Molecular weight: 34549 Da [This is the MW of the unprocessed precursor] CRC64: C9DD8C744D103A03 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MKPSVILYKK VADDLRARLD QHFTVTELDA FPALDHPALA TAEGIIGSGG KVDKDFLQHA 

        70         80         90        100        110        120 
PRLRAASTIS VGYDTFNVDA LNEKGVILMH TPTVLTETVA DTVLALMLAS ARRVVEVVER 

       130        140        150        160        170        180 
VKAGEWKGGV GSDWFGTDVH HKTIGILGMG RIGLAVAQRA HFGFSMPVLY NARRHHAEAE 

       190        200        210        220        230        240 
ERFNARHCDL DTLLAESDFL CITLPLTAET HHLIGREQLA KMKPSAILIN IGRGAVVDED 

       250        260        270        280        290        300 
ALTEALVKGT IQAAGLDVFV KEPLPVDSPL LDLPNVVALP HIGSATHETR YDMAACAVDN 

       310        320 
LIAALSGQVK ENCVNPQVLK
Q6DB24 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by ch flag SIB Switzerland Mirror sites: Australia Brazil Canada China Korea
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!