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UniProtKB/Swiss-Prot entry Q64288


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name OMP_MOUSE
Primary accession number Q64288
Secondary accession numbers None
Integrated into Swiss-Prot on October 11, 2004
Sequence was last modified on January 23, 2007 (Sequence version 3)
Annotations were last modified on    December 16, 2008 (Entry version 60)
Name and origin of the protein
Protein name Olfactory marker protein
Synonyms None
Gene name
Name: Omp
From
Mus musculus (Mouse) [TaxID: 10090] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE.
DOI=10.1007/BF00360561; PubMed=8111122 [NCBI, ExPASy, EBI, Israel, Japan]
Brown K.A., Sutcliffe M.J., Steele K., Brown S.D.;
"Sequencing of the olfactory marker protein gene in normal and shaker-1 mutant mice.";
Mamm. Genome 5:11-14(1994).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=129;
DOI=10.1006/geno.1994.1200; PubMed=8034318 [NCBI, ExPASy, EBI, Israel, Japan]
Buiakova O.I., Rama Krishna N.S., Getchell T.V., Margolis F.L.;
"Human and rodent OMP genes: conservation of structural and regulatory motifs and cellular localization.";
Genomics 20:452-462(1994).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Olfactory epithelium;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
INTERACTION WITH BEX1 AND BEX2.
PubMed=12911636 [NCBI, ExPASy, EBI, Israel, Japan]
Behrens M., Margolis J.W., Margolis F.L.;
"Identification of members of the Bex gene family as olfactory marker protein (OMP) binding partners.";
J. Neurochem. 86:1289-1296(2003).
[5]
INTERACTION WITH BEX1 AND BEX2.
DOI=10.1111/j.1471-4159.2004.02463.x; PubMed=15198671 [NCBI, ExPASy, EBI, Israel, Japan]
Koo J.H., Gill S., Pannell L.K., Menco B.P.M., Margolis J.W., Margolis F.L.;
"The interaction of Bex and OMP reveals a dimer of OMP with a short half-life.";
J. Neurochem. 90:102-116(2004).
[6]
X-RAY CRYSTALLOGRAPHY (2.3 ANGSTROMS).
DOI=10.1016/S0022-2836(02)00242-5; PubMed=12054872 [NCBI, ExPASy, EBI, Israel, Japan]
Smith P.C., Firestein S., Hunt J.F.;
"The crystal structure of the olfactory marker protein at 2.3 A resolution.";
J. Mol. Biol. 319:807-821(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U02557; AAA18415.1; -; Unassigned_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
U01213; AAA20486.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC046600; AAH46600.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B54261; B54261.
RefSeq NP_035140.1; -.
UniGene Mm.440368
3D structure databases
PDB
1F35; X-ray; 2.30 A; A/B=1-163.[ExPASy / RCSB / EBI]
1JOB; X-ray; 2.40 A; A=1-163.[ExPASy / RCSB / EBI]
1JOD; X-ray; 3.20 A; A/B=1-163.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1F35; -.
1JOB; -.
1JOD; -.
ModBase Q64288.
Organism-specific databases
MGI MGI:97436; Omp.
Gene expression databases
ArrayExpress Q64288; -.
CleanEx MM_OMP; -.
GermOnline ENSMUSG00000074006; Mus musculus.
Ontologies
GO
GO:0030424; Cellular component: axon (inferred from direct assay from MGI).
GO:0043025; Cellular component: cell soma (inferred from direct assay from MGI).
GO:0005829; Cellular component: cytosol (inferred from direct assay from MGI).
GO:0005634; Cellular component: nucleus (inferred from direct assay from MGI).
GO:0005515; Molecular function: protein binding (inferred from electronic annotation from InterPro).
GO:0004871; Molecular function: signal transducer activity (inferred from mutant phenotype from MGI).
GO:0050896; Biological process: response to stimulus (inferred from electronic annotation from UniProtKB-KW).
GO:0007608; Biological process: sensory perception of smell (inferred from mutant phenotype from MGI).
GO:0007165; Biological process: signal transduction (inferred from electronic annotation from InterPro).
QuickGo view.
Family and domain databases
InterPro IPR009103; Olfactory_marker.
Graphical view of domain structure.
Gene3D G3DSA:2.60.120.390; Olfactory_marker; 1.
PANTHER PTHR15357; Olfactory_marker; 1.
Pfam PF06554; Olfactory_mark; 1.
Pfam graphical view of domain structure.
ProDom PD022055; Olfactory_marker; 1.
[Domain structure / List of seq. sharing at least 1 domain]
Proteomics databases
PRIDE Q64288; -.
Genome annotation databases
Ensembl ENSMUSG00000074006; Mus musculus. [Contig view]
GeneID 18378; -.
KEGG mmu:18378; -.
Phylogenomic databases
HOGENOM Q64288; -.
HOVERGEN Q64288; -.
Other
LinkHub Q64288; -.
NextBio 293958; -.
SOURCE Omp; Mus musculus.
ProtoNet Q64288.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
3D-structure; Acetylation; Cytoplasm; Olfaction; Sensory transduction.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
INIT_MET   1     1        Removed (By similarity). 
CHAIN   2   163  162     Olfactory marker protein. PRO_0000058045
MOD_RES   2     2        N-acetylalanine (By similarity). 
STRAND   10    14  5      
HELIX   19    34  16      
STRAND   50    56  7      
STRAND   61    83  23      
TURN   89    91  3      
HELIX   96    98  3      
STRAND   104   108  5      
STRAND   115   117  3      
HELIX   119   135  17      
STRAND   137   145  9      
HELIX   151   153  3      
STRAND   154   162  9      
Sequence information
Length: 163 AA [This is the length of the unprocessed precursor] Molecular weight: 18867 Da [This is the MW of the unprocessed precursor] CRC64: D50EA5937D7EAE16 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAEDGPQKQQ LEMPLVLDQD LTQQMRLRVE SLKQRGEKKQ DGEKLIRPAE SVYRLDFIQQ 

        70         80         90        100        110        120 
QKLQFDHWNV VLDKPGKVTI TGTSQNWTPD LTNLMTRQLL DPAAIFWRKE DSDAMDWNEA 

       130        140        150        160 
DALEFGERLS DLAKIRKVMY FLITFGEGVE PANLKASVVF NQL 

Q64288 in FASTA format

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BLAST logo BLAST submission on ExPASy/SIB
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Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
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