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UniProtKB/Swiss-Prot entry Q38825


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name IAA7_ARATH
Primary accession number Q38825
Secondary accession number Q8LAK1
Integrated into Swiss-Prot on December 1, 2000
Sequence was last modified on November 1, 1996 (Sequence version 1)
Annotations were last modified on    July 22, 2008 (Entry version 70)
Name and origin of the protein
Protein name Auxin-responsive protein IAA7
Synonyms Indoleacetic acid-induced protein 7
Auxin resistant 2
Gene name
Name: IAA7
Synonyms: AXR2
OrderedLocusNames: At3g23050
ORFNames: MXC7.8
From
Arabidopsis thaliana (Mouse-ear cress) [TaxID: 3702] 
Taxonomy Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION.
STRAIN=cv. Columbia;
DOI=10.1006/jmbi.1995.0454; PubMed=7658471 [NCBI, ExPASy, EBI, Israel, Japan]
Abel S., Nguyen M.D., Theologis A.;
"The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana.";
J. Mol. Biol. 251:533-549(1995).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
DOI=10.1093/dnares/7.2.131; PubMed=10819329 [NCBI, ExPASy, EBI, Israel, Japan]
Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones.";
DNA Res. 7:131-135(2000).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
DOI=10.1126/science.1088305; PubMed=14593172 [NCBI, ExPASy, EBI, Israel, Japan]
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis genome.";
Science 302:842-846(2003).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[5]
MUTANT AXR2-1.
DOI=10.1104/pp.123.2.563; PubMed=10859186 [NCBI, ExPASy, EBI, Israel, Japan]
Nagpal P., Walker L.M., Young J.C., Sonawala A., Timpte C., Estelle M., Reed J.W.;
"AXR2 encodes a member of the Aux/IAA protein family.";
Plant Physiol. 123:563-574(2000).
[6]
GENE FAMILY, NOMENCLATURE, AND FUNCTION.
DOI=10.1023/A:1015255030047; PubMed=12036262 [NCBI, ExPASy, EBI, Israel, Japan]
Liscum E., Reed J.W.;
"Genetics of Aux/IAA and ARF action in plant growth and development.";
Plant Mol. Biol. 49:387-400(2002).
[7]
TRANSCRIPTIONAL REPRESSION DOMAIN.
DOI=10.1105/tpc.017384; PubMed=14742873 [NCBI, ExPASy, EBI, Israel, Japan]
Tiwari S.B., Hagen G., Guilfoyle T.J.;
"Aux/IAA proteins contain a potent transcriptional repression domain.";
Plant Cell 16:533-543(2004).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
U18409; AAC49048.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AB026655; BAB02096.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AF332395; AAG48759.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY054651; AAK96842.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY072461; AAL66876.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
AY087765; AAM65301.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR S58494; S58494.
RefSeq NP_188945.1; -.
UniGene At.22260
3D structure databases
ModBase Q38825.
Protein-protein interaction databases
IntAct Q38825; -.
Organism-specific databases
GeneFarm 3154; 342.
TAIR At3g23050; -.
Gene expression databases
ArrayExpress Q38825; -.
Ontologies
GO
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
QuickGo view.
Family and domain databases
InterPro IPR003311; AUX_IAA.
IPR011525; AuxIAA_ARF_dimer.
Graphical view of domain structure.
Pfam PF02309; AUX_IAA; 1.
Pfam graphical view of domain structure.
PROSITE PS50962; IAA_ARF; 1.
PROSITE graphical view of domain structure (profiles).
BLOCKS Q38825.
Genome annotation databases
GeneID 821879; -.
GenomeReviews BA000014_GR; AT3G23050.
KEGG ath:AT3G23050; -.
NMPDR fig|3702.1.peg.14555; -.
Other
ProtoNet Q38825.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Alternative splicing; Auxin signaling pathway; Complete proteome; Nucleus; Repressor; Transcription; Transcription regulation.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   243  243     Auxin-responsive protein IAA7. PRO_0000112838
DOMAIN   125   225  101     Aux/IAA-ARF. 
MOTIF   13    17  5     EAR-like (transcriptional repression). 
MUTAGEN   87    87        P->S: In axr2-1; gain of function. Affects auxin-related developmental processes. Affects photomorphogenesis. 
CONFLICT   228   228        V -> I (in Ref. 4; AAM65301). 
Sequence information
Length: 243 AA [This is the length of the unprocessed precursor] Molecular weight: 26381 Da [This is the MW of the unprocessed precursor] CRC64: 830E9B9EA2C2B5D0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MIGQLMNLKA TELCLGLPGG AEAVESPAKS AVGSKRGFSE TVDLMLNLQS NKEGSVDLKN 

        70         80         90        100        110        120 
VSAVPKEKTT LKDPSKPPAK AQVVGWPPVR NYRKNMMTQQ KTSSGAEEAS SEKAGNFGGG 

       130        140        150        160        170        180 
AAGAGLVKVS MDGAPYLRKV DLKMYKSYQD LSDALAKMFS SFTMGNYGAQ GMIDFMNESK 

       190        200        210        220        230        240 
LMNLLNSSEY VPSYEDKDGD WMLVGDVPWE MFVESCKRLR IMKGSEAVGL APRAMEKYCK 


NRS 

Q38825 in FASTA format

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