ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!
Search for

UniProtKB/Swiss-Prot entry P61108

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

Note: most headings are clickable, even if they don't appear as links. They link to the user manual or other documents.
Entry information
Entry name DEOC1_STAAM
Primary accession number P61108
Secondary accession number Q99X77
Integrated into Swiss-Prot on April 26, 2004
Sequence was last modified on April 26, 2004 (Sequence version 1)
Annotations were last modified on    June 10, 2008 (Entry version 35)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase 1
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase 1
Deoxyriboaldolase 1
DERA 1
Gene name
Name: deoC1
Synonyms: dra
OrderedLocusNames: SAV0138
From
Staphylococcus aureus (strain Mu50 / ATCC 700699) [TaxID: 158878] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Bacillales; Staphylococcus.
Protein existence 1: Evidence at protein level;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1016/S0140-6736(00)04403-2; PubMed=11418146 [NCBI, ExPASy, EBI, Israel, Japan]
Kuroda M., Ohta T., Uchiyama I., Baba T., Yuzawa H., Kobayashi I., Cui L., Oguchi A., Aoki K., Nagai Y., Lian J.-Q., Ito T., Kanamori M., Matsumaru H., Maruyama A., Murakami H., Hosoyama A., Mizutani-Ui Y., Takahashi N.K., Sawano T., Inoue R., Kaito C., Sekimizu K., Hirakawa H., Kuhara S., Goto S., Yabuzaki J., Kanehisa M., Yamashita A., Oshima K., Furuya K., Yoshino C., Shiba T., Hattori M., Ogasawara N., Hayashi H., Hiramatsu K.;
"Whole genome sequencing of meticillin-resistant Staphylococcus aureus.";
Lancet 357:1225-1240(2001).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
BA000017; BAB56300.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq NP_370662.1; -.
3D structure databases
HSSP Q9X1P5; 1O0Y. [HSSP ENTRY / PDB]
ModBase P61108.
Enzyme and pathway databases
BioCyc SAUR158878:SAV0138-MON; -.
2D gel databases
World-2DPAGE 0002:P61108; -.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR013785; Aldolase_TIM.
IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
Gene3D G3DSA:3.20.20.70; Aldolase_TIM; 1.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
BLOCKS P61108.
Genome annotation databases
GeneID 1120097; -.
GenomeReviews BA000017_GR; SAV0138.
KEGG sav:SAV0138; -.
Phylogenomic databases
HOGENOM P61108; -.
Other
LinkHub P61108; -.
Genome annotation databases
CMR P61108; SAV0138.
Other
ProtoNet P61108.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   220  220     Deoxyribose-phosphate aldolase 1. PRO_0000057257
ACT_SITE   151   151        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   180   180        By similarity. 
Sequence information
Length: 220 AA [This is the length of the unprocessed precursor] Molecular weight: 23472 Da [This is the MW of the unprocessed precursor] CRC64: A77DAC561C6B70A3 [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MKFEKYIDHT LLKPESTRTQ IDQIIDEAKA YNFKSVCVNP THVKYAAERL ADSEVLVCTV 

        70         80         90        100        110        120 
IGFPLGASTT ATKAFETEDA IQNGADEIDM VINIGALKDG RFDDVQQDIE AVVKAAKGHT 

       130        140        150        160        170        180 
VKVIIETVLL DHDEIVKASE LTKAAGADFV KTSTGFAGGG ATAEDVKLMK DTVGADVEVK 

       190        200        210        220 
ASGGVRNLED FNKMVEAGAT RIGASAGVQI MQGLEADSDY
P61108 in FASTA format

View entry in original UniProtKB/Swiss-Prot format
View entry in raw text format (no links)
Report form for errors/updates in this UniProtKB/Swiss-Prot entry

BLAST logo BLAST submission on ExPASy/SIB
or at NCBI (USA) 		Tools Sequence analysis tools: ProtParam, ProtScale, Compute pI/Mw, PeptideMass, PeptideCutter, Dotlet (Java)
PROSITE logo ScanProsite, MotifScan SWISS-MODEL Submit a homology modeling request to SWISS-MODEL
NPSA logo NPSA Sequence analysis tools

ExPASy logo ExPASy Home page Site Map Search ExPASy Contact us Swiss-Prot
Hosted by au flag APAF Australia Mirror sites: Brazil Canada China Korea Switzerland
Notice: This page will be replaced with www.uniprot.org. Please send us your feedback!