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UniProtKB/Swiss-Prot entry P26829


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DHNA_BACYN
Primary accession number P26829
Secondary accession numbers None
Integrated into Swiss-Prot on August 1, 1992
Sequence was last modified on August 1, 1992 (Sequence version 1)
Annotations were last modified on    November 25, 2008 (Entry version 75)
Name and origin of the protein
Protein name NADH dehydrogenase
Synonyms EC 1.6.99.3
Alkyl hydroperoxide reductase
Gene name
Name: ahpF
Synonyms: ndh
From
Bacillus sp. (strain YN-1) [TaxID: 72581] 
Taxonomy Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1917890 [NCBI, ExPASy, EBI, Israel, Japan]
Xu X., Koyama N., Cui M., Yamagishi A., Nosoh Y., Oshima T.;
"Nucleotide sequence of the gene encoding NADH dehydrogenase from an alkalophile, Bacillus sp. strain YN-1.";
J. Biochem. 109:678-683(1991).
[2]
PARTIAL PROTEIN SEQUENCE.
PubMed=2760020 [NCBI, ExPASy, EBI, Israel, Japan]
Xu X., Kanaya S., Koyama N., Sekiguchi T., Nosoh Y., Ohashi S., Tsuda K.;
"Tryptic digestion of NADH dehydrogenase from alkalophilic Bacillus.";
J. Biochem. 105:626-632(1989).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
D10701; BAA01545.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
3D structure databases
HSSP P35340; 1FL2. [HSSP ENTRY / PDB]
ModBase P26829.
Ontologies
GO
GO:0005886; Cellular component: plasma membrane (inferred from electronic annotation from UniProtKB-KW).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0050660; Molecular function: FAD binding (inferred from electronic annotation from InterPro).
GO:0051287; Molecular function: NAD binding (inferred from electronic annotation from InterPro).
GO:0003954; Molecular function: NADH dehydrogenase activity (inferred from electronic annotation from EC).
GO:0015035; Molecular function: protein disulfide oxidoreductase activity (inferred from electronic annotation from InterPro).
GO:0045454; Biological process: cell redox homeostasis (inferred from electronic annotation from InterPro).
GO:0022900; Biological process: electron transport chain (inferred from electronic annotation from UniProtKB-KW).
GO:0006810; Biological process: transport (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR000759; Adrndx_reductase.
IPR012081; Alkyl_hydroperoxide_Rdtase_suF.
IPR013027; FAD_pyr_nucl-diS_OxRdtase.
IPR008255; Pyr_nucl-diS_OxRdtase_2_AS.
IPR001327; Pyr_OxRdtase_NAD_bd.
IPR000103; Pyridine_nuc-diS_OxRdtase_2.
IPR012335; Thioredoxin_fold.
Graphical view of domain structure.
Gene3D G3DSA:3.40.30.10; Thioredoxin_fold; 2.
Pfam PF00070; Pyr_redox; 1.
PF07992; Pyr_redox_2; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF000238; AhpF; 1.
PRINTS PR00419; ADXRDTASE.
PR00368; FADPNR.
PR00469; PNDRDTASEII.
ProDom PD000139; FAD_pyr_redox; 1.
[Domain structure / List of seq. sharing at least 1 domain]
TIGRFAMs TIGR03140; AhpF; 1.
PROSITE PS51354; GLUTAREDOXIN_2; 1.
PS00573; PYRIDINE_REDOX_2; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P26829.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Cell membrane; Direct protein sequencing; Electron transport; FAD; Flavoprotein; Membrane; NAD; Oxidoreductase; Redox-active center; Transport; Ubiquinone.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom    To Length Description FTId
CHAIN   1    519  519     NADH dehydrogenase. PRO_0000166788
NP_BIND   210    241  32     FAD (By similarity). 
NP_BIND   349    379  31     NAD (By similarity). 
NP_BIND   469    479  11     FAD (By similarity). 
REGION   1   ?183        Membrane-binding. 
REGION   ?184    519        Catalytic. 
DISULFID   337    340        Redox-active (By similarity). 
Sequence information
Length: 519 AA [This is the length of the unprocessed precursor] Molecular weight: 55830 Da [This is the MW of the unprocessed precursor] CRC64: 054FA461B5A156C2 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MVLEPQIKSQ LNQYLQLMEG DVLLKVSAGN DKVSEDMLSL VDELASMSSR ITVEKTNLER 

        70         80         90        100        110        120 
TPSFSVNRPG EDTGIVFAGI PLGHEFTSLV LALLQVSGRA PKAEQNVIDQ IKNIEGEYHF 

       130        140        150        160        170        180 
ESYISLSCQN CPDVVQALNL MSVLNPGISH TMIDGAAFKD EVESKDIMAV PTVYLNGESF 

       190        200        210        220        230        240 
TSGRMTVEEI LAQLGSGPDA SELADKDPFD VLVVGGGPAG ASSAIYAARK GIRTGIVADR 

       250        260        270        280        290        300 
FGGQIMDTLS IENFISQKYT EGPKLAASLE EHVKEYDIDV MKLQRAKRLE KKDLIEIELE 

       310        320        330        340        350        360 
NGAVLKSKSV ILSTGARWRN VGVPGEQEFK NKGVAYCPHC DGPLFEGKDV AVIGGGNSGV 

       370        380        390        400        410        420 
EAAIDLAGIV NHVTVLEFMP ELKADEVLQE RLNSLPNVTV IKNAQTKEIT GDDKVNGISY 

       430        440        450        460        470        480 
MDRDTEEVHH IELAGVFVQI GLVPNTDWLD GTLERNRFGE IVVDSHGATN VPGVFAAGDC 

       490        500        510 
TNSAYKQIII SMGSGATAAL GAFDYLIRNT TPAESAAAK 

P26829 in FASTA format

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