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UniProtKB/Swiss-Prot entry P19921


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DCMS_OLICA
Primary accession number P19921
Secondary accession number Q51324
Integrated into Swiss-Prot on February 1, 1991
Sequence was last modified on July 26, 2002 (Sequence version 2)
Annotations were last modified on    November 25, 2008 (Entry version 72)
Name and origin of the protein
Protein name Carbon monoxide dehydrogenase small chain
Synonyms CO dehydrogenase subunit S
CO-DH S
EC 1.2.99.2
Gene name
Name: coxS
From
Oligotropha carboxidovorans (Pseudomonas carboxydovorans) [TaxID: 40137] 
Encoded on Plasmid megaplasmid pHCG3.
Taxonomy Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=CH5 / OM5 / DSM 1227;
PubMed=7721710 [NCBI, ExPASy, EBI, Israel, Japan]
Schuebel U., Kraut M., Moersdorf G., Meyer O.;
"Molecular characterization of the gene cluster coxMSL encoding the molybdenum-containing carbon monoxide dehydrogenase of Oligotropha carboxidovorans.";
J. Bacteriol. 177:2197-2203(1995).
[2]
PROTEIN SEQUENCE OF 1-21.
STRAIN=CH5 / OM5 / DSM 1227;
DOI=10.1007/BF00425170; PubMed=2818128 [NCBI, ExPASy, EBI, Israel, Japan]
Kraut M., Hugendieck I., Herwig S., Meyer O.;
"Homology and distribution of CO dehydrogenase structural genes in carboxydotrophic bacteria.";
Arch. Microbiol. 152:335-341(1989).
[3]
X-RAY CRYSTALLOGRAPHY (2.2 ANGSTROMS).
DOI=10.1073/pnas.96.16.8884; PubMed=10430865 [NCBI, ExPASy, EBI, Israel, Japan]
Dobbek H., Gremer L., Meyer O., Huber R.;
"Crystal structure and mechanism of CO dehydrogenase, a molybdo iron-sulfur flavoprotein containing S-selanylcysteine.";
Proc. Natl. Acad. Sci. U.S.A. 96:8884-8889(1999).
[4]
X-RAY CRYSTALLOGRAPHY (1.09 ANGSTROMS).
DOI=10.1073/pnas.212640899; PubMed=12475995 [NCBI, ExPASy, EBI, Israel, Japan]
Dobbek H., Gremer L., Kiefersauer R., Huber R., Meyer O.;
"Catalysis at a dinuclear CuSMo(==O)OH cluster in a CO dehydrogenase resolved at 1.1-A resolution.";
Proc. Natl. Acad. Sci. U.S.A. 99:15971-15976(2002).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
X82447; CAA57828.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR B56279; B56279.
RefSeq YP_015604.1; -.
3D structure databases
PDB
1N5W; X-ray; 1.50 A; A/D=1-166.[ExPASy / RCSB / EBI]
1N60; X-ray; 1.19 A; A/D=1-166.[ExPASy / RCSB / EBI]
1N61; X-ray; 1.30 A; A/D=1-166.[ExPASy / RCSB / EBI]
1N62; X-ray; 1.09 A; A/D=1-166.[ExPASy / RCSB / EBI]
1N63; X-ray; 1.21 A; A/D=1-166.[ExPASy / RCSB / EBI]
1ZXI; X-ray; 1.70 A; A/D=1-166.[ExPASy / RCSB / EBI]
Detailed list of linked structures.
PDBsum 1N5W; -.
1N60; -.
1N61; -.
1N62; -.
1N63; -.
1ZXI; -.
ModBase P19921.
Ontologies
GO
GO:0051537; Molecular function: 2 iron, 2 sulfur cluster binding (inferred from electronic annotation from UniProtKB-KW).
GO:0018492; Molecular function: carbon-monoxide dehydrogenase (acceptor) activity (inferred from electronic annotation from EC).
GO:0009055; Molecular function: electron carrier activity (inferred from electronic annotation from InterPro).
GO:0005506; Molecular function: iron ion binding (inferred from electronic annotation from UniProtKB-KW).
GO:0055114; Biological process: oxidation reduction (inferred from electronic annotation from UniProtKB-KW).
QuickGo view.
Family and domain databases
InterPro IPR002888; 2Fe-2S_bd.
IPR006058; 2Fe2S_fd_BS.
IPR001041; Ferredoxin.
Graphical view of domain structure.
Pfam PF00111; Fer2; 1.
PF01799; Fer2_2; 1.
Pfam graphical view of domain structure.
ProDom PD186071; 2Fe-2S_bind; 1.
[Domain structure / List of seq. sharing at least 1 domain]
PROSITE PS00197; 2FE2S_FER_1; FALSE_NEG.
PS51085; 2FE2S_FER_2; 1.
PROSITE graphical view of domain structure (profiles).
ProtoNet P19921.
Genome annotation databases
GeneID 2807117; -.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
2Fe-2S; 3D-structure; Direct protein sequencing; Iron; Iron-sulfur; Metal-binding; Oxidoreductase; Plasmid.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   166  166     Carbon monoxide dehydrogenase small chain. PRO_0000079817
DOMAIN   4    80  77     2Fe-2S ferredoxin-type. 
METAL   42    42        Iron-sulfur 1 (2Fe-2S). 
METAL   47    47        Iron-sulfur 1 (2Fe-2S). 
METAL   50    50        Iron-sulfur 1 (2Fe-2S). 
METAL   62    62        Iron-sulfur 1 (2Fe-2S). 
METAL   102   102        Iron-sulfur 2 (2Fe-2S). 
METAL   105   105        Iron-sulfur 2 (2Fe-2S). 
METAL   137   137        Iron-sulfur 2 (2Fe-2S). 
METAL   139   139        Iron-sulfur 2 (2Fe-2S). 
STRAND   4    10  7      
STRAND   13    19  7      
HELIX   25    31  7      
STRAND   43    45  3      
STRAND   51    54  4      
STRAND   57    60  4      
HELIX   61    63  3      
HELIX   66    69  4      
STRAND   73    75  3      
HELIX   77    79  3      
HELIX   89    96  8      
HELIX   106   119  14      
HELIX   125   131  7      
TURN   132   134  3      
STRAND   138   140  3      
HELIX   143   157  15      
Sequence information
Length: 166 AA [This is the length of the unprocessed precursor] Molecular weight: 17792 Da [This is the MW of the unprocessed precursor] CRC64: E63AD31D726D22C1 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MAKAHIELTI NGHPVEALVE PRTLLIHFIR EQQNLTGAHI GCDTSHCGAC TVDLDGMSVK 

        70         80         90        100        110        120 
SCTMFAVQAN GASITTIEGM AAPDGTLSAL QEGFRMMHGL QCGYCTPGMI MRSHRLLQEN 

       130        140        150        160 
PSPTEAEIRF GIGGNLCRCT GYQNIVKAIQ YAAAKINGVP FEEAAE 

P19921 in FASTA format

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