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UniProtKB/Swiss-Prot entry P13645


[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name K1C10_HUMAN
Primary accession number P13645
Secondary accession numbers Q14664 Q8N175
Integrated into Swiss-Prot on January 1, 1990
Sequence was last modified on May 15, 2007 (Sequence version 4)
Annotations were last modified on    September 23, 2008 (Entry version 91)
Name and origin of the protein
Protein name Keratin, type I cytoskeletal 10
Synonyms Cytokeratin-10
CK-10
Keratin-10
K10
Gene name
Name: KRT10
Synonyms: KPP
From
Homo sapiens (Human) [TaxID: 9606] 
Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
Protein existence 1: Evidence at protein level;
References
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Foreskin;
PubMed=2459124 [NCBI, ExPASy, EBI, Israel, Japan]
Zhou X.M., Idler W.W., Steven A.C., Roop D.R., Steinert P.M.;
"The complete sequence of the human intermediate filament chain keratin 10. Subdomainal divisions and model for folding of end domain sequences.";
J. Biol. Chem. 263:15584-15589(1988).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
DOI=10.1016/0022-2836(88)90045-9; PubMed=2464696 [NCBI, ExPASy, EBI, Israel, Japan]
Rieger M., Franke W.W.;
"Identification of an orthologous mammalian cytokeratin gene. High degree of intron sequence conservation during evolution of human cytokeratin 10.";
J. Mol. Biol. 204:841-856(1988).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Skin;
DOI=10.1101/gr.2596504; PubMed=15489334 [NCBI, ExPASy, EBI, Israel, Japan]
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 130-593.
DOI=10.1007/BF00444680; PubMed=2448602 [NCBI, ExPASy, EBI, Israel, Japan]
Darmon M.Y., Semat A., Darmon M.C., Vasseur M.;
"Sequence of a cDNA encoding human keratin No 10 selected according to structural homologies of keratins and their tissue-specific expression.";
Mol. Biol. Rep. 12:277-283(1987).
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 147-161, AND VARIANTS BCIE HIS-156 AND ASN-160.
DOI=10.1111/1523-1747.ep12371723; PubMed=7507150 [NCBI, ExPASy, EBI, Israel, Japan]
Rothnagel J.A., Longley M.A., Holder R.A., Kuster W., Roop D.R.;
"Prenatal diagnosis of epidermolytic hyperkeratosis by direct gene sequencing.";
J. Invest. Dermatol. 102:13-16(1994).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 147-161, AND VARIANT BCIE CYS-156.
Rothnagel J.J., Dominey A., Fisher M., Axtell S., Pittelkow M., Anton-Lamprecht I., Hohl D., Roop D.;
"Identification of mutational hot spots in the suprabasal keratin genes from patients with epidermolytic hyperkeratosis.";
Submitted (JUN-1993) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [MRNA] OF 197-593.
DOI=10.1016/0378-1119(92)90521-P; PubMed=1378806 [NCBI, ExPASy, EBI, Israel, Japan]
Tkachenko A.V., Buchman V.L., Bliskovsky V.V., Shvets Y.P., Kisselev L.L.;
"Exons I and VII of the gene (Ker10) encoding human keratin 10 undergo structural rearrangements within repeats.";
Gene 116:245-251(1992).
[8]
PROTEIN SEQUENCE OF 180-184 AND 577-589.
TISSUE=Keratinocyte;
PubMed=1286667 [NCBI, ExPASy, EBI, Israel, Japan]
Rasmussen H.H., van Damme J., Puype M., Gesser B., Celis J.E., Vandekerckhove J.;
"Microsequences of 145 proteins recorded in the two-dimensional gel protein database of normal human epidermal keratinocytes.";
Electrophoresis 13:960-969(1992).
[9]
VARIANT BCIE HIS-156.
DOI=10.1016/0092-8674(92)90314-3; PubMed=1381287 [NCBI, ExPASy, EBI, Israel, Japan]
Cheng J., Syder A.J., Yu Q.-C., Letai A., Paller A.S., Fuchs E.;
"The genetic basis of epidermolytic hyperkeratosis: a disorder of differentiation-specific epidermal keratin genes.";
Cell 70:811-819(1992).
[10]
VARIANTS.
PubMed=1371013 [NCBI, ExPASy, EBI, Israel, Japan]
Korge B.P., Gan S.-Q., McBridge O.W., Mischke D., Steinert P.M.;
"Extensive size polymorphism of the human keratin 10 chain resides in the C-terminal V2 subdomain due to variable numbers and sizes of glycine loops.";
Proc. Natl. Acad. Sci. U.S.A. 89:910-914(1992).
[11]
VARIANTS BCIE HIS-156 AND SER-161.
PubMed=1380725 [NCBI, ExPASy, EBI, Israel, Japan]
Rothnagel J.A., Dominey A.M., Dempsey L.D., Longley M.A., Greenhalgh D.A., Gagne T.A., Huber M., Frenk E., Hohl D., Roop D.R.;
"Mutations in the rod domains of keratins 1 and 10 in epidermolytic hyperkeratosis.";
Science 257:1128-1130(1992).
[12]
VARIANTS BCIE HIS-154; CYS-156; HIS-156; ASP-160 AND GLN-442.
PubMed=7508181 [NCBI, ExPASy, EBI, Israel, Japan]
Chipev C.C., Yang J.-M., Digiovanna J.J., Steinert P.M., Marekov L., Compton J.G., Bale S.J.;
"Preferential sites in keratin 10 that are mutated in epidermolytic hyperkeratosis.";
Am. J. Hum. Genet. 54:179-190(1994).
[13]
VARIANTS BCIE ARG-150; CYS-156 AND GLU-439, AND VARIANT SER-126.
PubMed=7512983 [NCBI, ExPASy, EBI, Israel, Japan]
Syder A.J., Yu Q.-C., Paller A.S., Giudice G., Pearson R., Fuchs E.;
"Genetic mutations in the K1 and K10 genes of patients with epidermolytic hyperkeratosis. Correlation between location and disease severity.";
J. Clin. Invest. 93:1533-1542(1994).
[14]
VARIANTS BCIE PRO-156 AND SER-156.
DOI=10.1111/1523-1747.ep12371726; PubMed=7507152 [NCBI, ExPASy, EBI, Israel, Japan]
McLean W.H.I., Eady R.A.J., Dopping-Hepenstal P.J.C., McMillan J.R., Leigh I.M., Navsaria H.A., Higgins C., Harper J.I., Paige D.G., Morley S.M.;
"Mutations in the rod 1A domain of keratins 1 and 10 in bullous congenital ichthyosiform erythroderma (BCIE).";
J. Invest. Dermatol. 102:24-30(1994).
[15]
VARIANT EPIDERMAL NEVUS EPIDERMOLYTIC HYPERKERATOTIC TYPE THR-150.
DOI=10.1056/NEJM199411243312103; PubMed=7526210 [NCBI, ExPASy, EBI, Israel, Japan]
Paller A.S., Syder A.J., Chan Y.-M., Yu Q.-C., Hutton M.E., Tadini G., Fuchs E.;
"Genetic and clinical mosaicism in a type of epidermal nevus.";
N. Engl. J. Med. 331:1408-1415(1994).
[16]
VARIANT AEI GLU-422.
DOI=10.1111/1523-1747.ep12286491; PubMed=9036939 [NCBI, ExPASy, EBI, Israel, Japan]
Joh G.-Y., Traupe H., Metze D., Nashan D., Huber M., Hohl D., Longley M.A., Rothnagel J.A., Roop D.R.;
"A novel dinucleotide mutation in keratin 10 in the annular epidermolytic ichthyosis variant of bullous congenital ichthyosiform erythroderma.";
J. Invest. Dermatol. 108:357-361(1997).
[17]
VARIANT AEI THR-446.
DOI=10.1046/j.1523-1747.1998.00451.x; PubMed=9856845 [NCBI, ExPASy, EBI, Israel, Japan]
Suga Y., Duncan K.O., Heald P.W., Roop D.R.;
"A novel helix termination mutation in keratin 10 in annular epidermolytic ichthyosis, a variant of bullous congenital ichthyosiform erythroderma.";
J. Invest. Dermatol. 111:1220-1223(1998).
[18]
VARIANT BCIE SER-160.
DOI=10.1046/j.1523-1747.1999.00557.x; PubMed=10201536 [NCBI, ExPASy, EBI, Israel, Japan]
Arin M.J., Longley M.A., Anton-Lamprecht I., Kurze G., Huber M., Hohl D., Rothnagel J.A., Roop D.R.;
"A novel substitution in keratin 10 in epidermolytic hyperkeratosis.";
J. Invest. Dermatol. 112:506-508(1999).
Comments
  • SUBUNIT: Heterotetramer of two type I and two type II keratins. keratin-10 is generally associated with keratin-1.
  • INTERACTION:
    Q00987:MDM2; NbExp=1; IntAct=EBI-465144, EBI-389668;
  • TISSUE SPECIFICITY: Seen in all suprabasal cell layers including stratum corneum.
  • POLYMORPHISM: A number of alleles are known that mainly differ in the Gly-rich region (positions 490-560).
  • DISEASE: Defects in KRT10 are a cause of bullous congenital ichthyosiform erythroderma (BCIE) [MIM:113800]; also known as epidermolytic hyperkeratosis (EHK) or bullous erythroderma ichthyosiformis congenita of Brocq. BCIE is an autosomal dominant skin disorder characterized by widespread blistering and an ichthyotic erythroderma at birth that persist into adulthood. Histologically there is a diffuse epidermolytic degeneration in the lower spinous layer of the epidermis. Within a few weeks from birth, erythroderma and blister formation diminish and hyperkeratoses develop.
  • DISEASE: Defects in KRT10 are a cause of ichthyosis annular epidermolytic (AEI) [MIM:607602]; also known as cyclic ichthyosis with epidermolytic hyperkeratosis. AEI is a skin disorder resembling bullous congenital ichthyosiform erythroderma. Affected individuals present with bullous ichthyosis in early childhood and hyperkeratotic lichenified plaques in the flexural areas and extensor surfaces at later ages. The feature that distinguishes AEI from BCIE is dramatic episodes of flares of annular polycyclic plaques with scale, which coalesce to involve most of the body surface and can persist for several weeks or even months.
  • DISEASE: Defects in KRT10 are a cause of epidermal nevus epidermolytic hyperkeratotic type [MIM:600648]. Epidermal nevi affect about 1 in 1,000 people. They appear at or shortly after birth as localized lines of epidermal thickening. The extent of skin involvement varies widely.
  • MISCELLANEOUS: There are two types of cytoskeletal and microfibrillar keratin: I (acidic; 40-55 kDa) and II (neutral to basic; 56-70 kDa).
  • SIMILARITY: Belongs to the intermediate filament family.
  • WEB RESOURCE: Name=Human Intermediate Filament Mutation Database; URL="http://www.interfil.org";.
  • WEB RESOURCE: Name=GeneReviews; URL="http://www.genetests.org/query?gene=KRT10";.
  • WEB RESOURCE: Name=Wikipedia; Note=Keratin-10 entry; URL="http://en.wikipedia.org/wiki/Keratin_10";.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
J04029; AAA60544.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
X14487; CAA32649.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
BC034697; AAH34697.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M19156; AAA59468.1; ALT_INIT; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
M77663; AAA59199.1; -; mRNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L20218; AAB59438.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
L20219; AAB59439.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
PIR A31994; A31994.
S02158; KRHU0.
UniGene Hs.99936
3D structure databases
HSSP P08670; 1GK7. [HSSP ENTRY / PDB]
ModBase P13645.
Protein-protein interaction databases
IntAct P13645; -.
PTM databases
PhosphoSite P13645; -.
2D gel databases
SWISS-2DPAGE P13645; -.
Aarhus/Ghent-2DPAGE 7405; IEF.
REPRODUCTION-2DPAGE P13645; -.
Organism-specific databases
HGNC HGNC:6413; KRT10.
GenAtlas KRT10.
HPA CAB000132; -.
HPA012014; -.
MIM 113800; phenotype. [NCBI / EBI]
148080; gene. [NCBI / EBI]
600648; phenotype. [NCBI / EBI]
607602; phenotype. [NCBI / EBI]
Orphanet 312; Bullous ichthyosiform erythroderma congenita.
313; Lamellar ichthyosis.
PharmGKB PA30200; -.
GeneCards P13645.
Gene expression databases
ArrayExpress P13645; -.
CleanEx HS_KRT10; -.
GermOnline ENSG00000186395; Homo sapiens.
Ontologies
GO
GO:0005882; Cellular component: intermediate filament (non-traceable author statement from UniProtKB).
GO:0005515; Molecular function: protein binding (inferred from physical interaction from IntAct).
GO:0030280; Molecular function: structural constituent of epidermis (non-traceable author statement from UniProtKB).
GO:0008544; Biological process: epidermis development (traceable author statement from ProtInc).
QuickGo view.
Family and domain databases
InterPro IPR016044; F.
IPR001664; IF.
IPR002957; Keratin_I.
Graphical view of domain structure.
PANTHER PTHR23239; IF; 1.
Pfam PF00038; Filament; 1.
Pfam graphical view of domain structure.
PRINTS PR01248; TYPE1KERATIN.
PROSITE PS00226; IF; 1.
BLOCKS P13645.
Proteomic databases
PeptideAtlas P13645; -.
Genome annotation databases
Ensembl ENSG00000186395; Homo sapiens. [Contig view]
KEGG hsa:3858; -.
Phylogenomic databases
HOGENOM P13645; -.
HOVERGEN P13645; -.
Other
SOURCE KRT10; Homo sapiens.
ProtoNet P13645.
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Coiled coil; Direct protein sequencing; Disease mutation; Ichthyosis; Intermediate filament; Keratin; Polymorphism.
Features
SEVIEWER logo Feature table viewer FT aligner logo Feature aligner
KeyFrom   To Length Description FTId
CHAIN   1   593  593     Keratin, type I cytoskeletal 10. PRO_0000063642
REGION   1   145  145     Head. 
REGION   146   456  311     Rod. 
REGION   146   181  36     Coil 1A. 
REGION   182   202  21     Linker 1. 
REGION   203   294  92     Coil 1B. 
REGION   295   317  23     Linker 12. 
REGION   318   456  139     Coil 2. 
REGION   457   593  137     Tail. 
COMPBIAS   6   144  139     Gly/Phe/Ser-rich. 
COMPBIAS   451   590  140     Gly/Ser-rich. 
VARIANT   126   126  1     G -> S. VAR_010505 
VARIANT   150   150  1     M -> R (in BCIE). VAR_010506 
VARIANT   150   150  1     M -> T (in epidermal nevus epidermolytic hyperkeratotic type). VAR_010507 
VARIANT   154   154  1     N -> H (in BCIE). VAR_003826 
VARIANT   156   156  1     R -> C (in BCIE). VAR_003828 
VARIANT   156   156  1     R -> H (in BCIE). VAR_003827 
VARIANT   156   156  1     R -> P (in BCIE). VAR_003829 
VARIANT   156   156  1     R -> S (in BCIE). VAR_003830 
VARIANT   160   160  1     Y -> D (in BCIE; severe phenotype). VAR_003831 
VARIANT   160   160  1     Y -> N (in BCIE; severe phenotype). VAR_010508 
VARIANT   160   160  1     Y -> S (in BCIE; severe phenotype). VAR_010509 
VARIANT   161   161  1     L -> S (in BCIE). VAR_003832 
VARIANT   422   422  1     R -> E (in AEI; requires 2 nucleotide substitutions). VAR_033145 
VARIANT   439   439  1     K -> E (in BCIE; mild phenotype). VAR_010510 
VARIANT   442   442  1     L -> Q (in BCIE). VAR_003833 
VARIANT   446   446  1     I -> T (in AEI). VAR_010511 
CONFLICT   9    11        KHY -> SKQF (in Ref. 1; AAA60544). 
CONFLICT   24    31        Missing (in Ref. 1; AAA60544). 
CONFLICT   86    86        R -> H (in Ref. 2; CAA32649). 
CONFLICT   106   106        S -> N (in Ref. 2; CAA32649). 
CONFLICT   181   184        WYEK -> RYDQ (in Ref. 1; AAA60544). 
CONFLICT   189   189        H -> R (in Ref. 1; AAA60544). 
CONFLICT   197   197        S -> G (in Ref. 7; AAA59199). 
CONFLICT   266   266        K -> Q (in Ref. 1; AAA60544). 
CONFLICT   279   280        EL -> YV (in Ref. 4; AAA59468). 
CONFLICT   287   287        H -> R (in Ref. 1; AAA60544). 
CONFLICT   293   293        D -> H (in Ref. 1; AAA60544). 
CONFLICT   312   312        V -> I (in Ref. 4; AAA59468). 
CONFLICT   323   323        S -> N (in Ref. 1; AAA60544). 
CONFLICT   340   340        F -> V (in Ref. 4; AAA59468). 
CONFLICT   374   374        A -> R (in Ref. 4; AAA59468). 
CONFLICT   408   408        Q -> H (in Ref. 2; CAA32649). 
CONFLICT   420   420        Q -> E (in Ref. 1; AAA60544). 
CONFLICT   436   436        L -> T (in Ref. 1; AAA60544). 
CONFLICT   451   451        S -> G (in Ref. 7; AAA59199). 
CONFLICT   460   461        GG -> RS (in Ref. 4; AAA59468). 
CONFLICT   477   477        S -> T (in Ref. 4; AAA59468). 
CONFLICT   482   482        S -> T (in Ref. 4; AAA59468). 
CONFLICT   487   490        Missing (in Ref. 7; AAA59199). 
CONFLICT   491   525        Missing (in Ref. 1; AAA60544). 
CONFLICT   503   503        S -> T (in Ref. 4; AAA59468). 
CONFLICT   508   508        S -> T (in Ref. 4; AAA59468). 
CONFLICT   513   519        YGGGSSS -> LRGELH (in Ref. 4; AAA59468). 
CONFLICT   523   536        GGGSSSGGHGGSSS -> AHST (in Ref. 4; AAA59468). 
CONFLICT   525   533        Missing (in Ref. 3; AAH34697 and 7; AAA59199). 
CONFLICT   543   543        S -> N (in Ref. 4; AAA59468). 
CONFLICT   544   544        S -> F (in Ref. 1; AAA60544). 
CONFLICT   551   555        YGGGS -> LRGRH (in Ref. 4; AAA59468). 
CONFLICT   574   574        G -> GGYGGGSSSGG (in Ref. 1; AAA60544). 
Sequence information
Length: 593 AA [This is the length of the unprocessed precursor] Molecular weight: 59511 Da [This is the MW of the unprocessed precursor] CRC64: B86B29834355A2D0 [This is a checksum on the sequence]
        10         20         30         40         50         60 
MSVRYSSSKH YSSSRSGGGG GGGGCGGGGG VSSLRISSSK GSLGGGFSSG GFSGGSFSRG 

        70         80         90        100        110        120 
SSGGGCFGGS SGGYGGLGGF GGGSFRGSYG SSSFGGSYGG SFGGGSFGGG SFGGGSFGGG 

       130        140        150        160        170        180 
GFGGGGFGGG FGGGFGGDGG LLSGNEKVTM QNLNDRLASY LDKVRALEES NYELEGKIKE 

       190        200        210        220        230        240 
WYEKHGNSHQ GEPRDYSKYY KTIDDLKNQI LNLTTDNANI LLQIDNARLA ADDFRLKYEN 

       250        260        270        280        290        300 
EVALRQSVEA DINGLRRVLD ELTLTKADLE MQIESLTEEL AYLKKNHEEE MKDLRNVSTG 

       310        320        330        340        350        360 
DVNVEMNAAP GVDLTQLLNN MRSQYEQLAE QNRKDAEAWF NEKSKELTTE IDNNIEQISS 

       370        380        390        400        410        420 
YKSEITELRR NVQALEIELQ SQLALKQSLE ASLAETEGRY CVQLSQIQAQ ISALEEQLQQ 

       430        440        450        460        470        480 
IRAETECQNT EYQQLLDIKI RLENEIQTYR SLLEGEGSSG GGGRGGGSFG GGYGGGSSGG 

       490        500        510        520        530        540 
GSSGGGYGGG HGGSSGGGYG GGSSGGGSSG GGYGGGSSSG GHGGGSSSGG HGGSSSGGYG 

       550        560        570        580        590 
GGSSGGGGGG YGGGSSGGGS SSGGGYGGGS SSGGHKSSSS GSVGESSSKG PRY 

P13645 in FASTA format

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