[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=3112144 [NCBI, ExPASy, EBI, Israel, Japan]
Thorsness P.E.,
Koshland D.E. Jr.;
"Inactivation of isocitrate dehydrogenase by phosphorylation is mediated by the negative charge of the phosphate.";
J. Biol. Chem. 262:10422-10425(1987).
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[2]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1093/dnares/3.3.137; PubMed=8905232 [NCBI, ExPASy, EBI, Israel, Japan]
Oshima T.,
Aiba H.,
Baba T.,
Fujita K.,
Hayashi K.,
Honjo A.,
Ikemoto K.,
Inada T.,
Itoh T.,
Kajihara M.,
Kanai K.,
Kashimoto K.,
Kimura S.,
Kitagawa M.,
Makino K.,
Masuda S.,
Miki T.,
Mizobuchi K.,
Mori H., ![]()
Motomura K.,
Nakamura Y.,
Nashimoto H.,
Nishio Y.,
Saito N.,
Sampei G.,
Seki Y.,
Tagami H.,
Takemoto K.,
Wada C.,
Yamamoto Y.,
Yano M.,
Horiuchi T.;
"A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.";
DNA Res. 3:137-155(1996).
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[3]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R.,
Plunkett G. III,
Bloch C.A.,
Perna N.T.,
Burland V.,
Riley M.,
Collado-Vides J.,
Glasner J.D.,
Rode C.K.,
Mayhew G.F.,
Gregor J.,
Davis N.W.,
Kirkpatrick H.A.,
Goeden M.A.,
Rose D.J.,
Mau B.,
Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
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[4]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K.,
Morooka N.,
Yamamoto Y.,
Fujita K.,
Isono K.,
Choi S.,
Ohtsubo E.,
Baba T.,
Wanner B.L.,
Mori H.,
Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
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[5]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 11-414.
STRAIN=CH734;
PubMed=9352899 [NCBI, ExPASy, EBI, Israel, Japan]
Wang F.-S.,
Whittam T.S.,
Selander R.K.;
"Evolutionary genetics of the isocitrate dehydrogenase gene (icd) in Escherichia coli and Salmonella enterica.";
J. Bacteriol. 179:6551-6559(1997).
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[6]
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PROTEIN SEQUENCE OF 1-12.
STRAIN=K12 / EMG2;
DOI=10.1002/elps.1150180807; PubMed=9298646 [NCBI, ExPASy, EBI, Israel, Japan]
Link A.J.,
Robison K.,
Church G.M.;
"Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.";
Electrophoresis 18:1259-1313(1997).
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[7]
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ENZYME KINETICS, AND MUTAGENESIS OF TYR-160 AND LYS-230.
DOI=10.1021/bi00001a046; PubMed=7819221 [NCBI, ExPASy, EBI, Israel, Japan]
Lee M.E.,
Dyer D.H.,
Klein O.D.,
Bolduc J.M.,
Stoddard B.L.,
Koshland D.E. Jr.;
"Mutational analysis of the catalytic residues lysine 230 and tyrosine 160 in the NADP(+)-dependent isocitrate dehydrogenase from Escherichia coli.";
Biochemistry 34:378-384(1995).
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[8]
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ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-142, AND MASS SPECTROMETRY.
DOI=10.1074/mcp.M800187-MCP200; PubMed=18723842 [NCBI, ExPASy, EBI, Israel, Japan]
Zhang J.,
Sprung R.,
Pei J.,
Tan X.,
Kim S.,
Zhu H.,
Liu C.F.,
Grishin N.V.,
Zhao Y.;
"Lysine acetylation is a highly abundant and evolutionarily conserved modification in E. coli.";
Mol. Cell. Proteomics 0:0-0(2008).
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[9]
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X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) IN COMPLEX WITH ISOCITRATE AND MAGNESIUM, PHOSPHORYLATION AT SER-113, AND MUTAGENESIS OF SER-113.
PubMed=2204109 [NCBI, ExPASy, EBI, Israel, Japan]
Hurley J.H.,
Dean A.M.,
Sohl J.L.,
Koshland D.E. Jr.,
Stroud R.M.;
"Regulation of an enzyme by phosphorylation at the active site.";
Science 249:1012-1016(1990).
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[10]
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X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) IN COMPLEX WITH ISOCITRATE; NADP AND MAGNESIUM, MUTAGENESIS OF TYR-160 AND LYS-230, AND BIOPHYSICOCHEMICAL PROPERTIES.
PubMed=7761851 [NCBI, ExPASy, EBI, Israel, Japan]
Bolduc J.M.,
Dyer D.H.,
Scott W.G.,
Singer P.,
Sweet R.M.,
Koshland D.E. Jr.,
Stoddard B.L.;
"Mutagenesis and Laue structures of enzyme intermediates: isocitrate dehydrogenase.";
Science 268:1312-1318(1995).
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[11]
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X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) IN COMPLEX WITH NADP, AND SUBUNIT.
PubMed=2682654 [NCBI, ExPASy, EBI, Israel, Japan]
Hurley J.H.,
Thorsness P.E.,
Ramalingam V.,
Helmers N.H.,
Koshland D.E. Jr.,
Stroud R.M.;
"Structure of a bacterial enzyme regulated by phosphorylation, isocitrate dehydrogenase.";
Proc. Natl. Acad. Sci. U.S.A. 86:8635-8639(1989).
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[12]
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X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF MUTANT MET-230.
DOI=10.1006/jmbi.1999.3195; PubMed=10623532 [NCBI, ExPASy, EBI, Israel, Japan]
Cherbavaz D.B.,
Lee M.E.,
Stroud R.M.,
Koshland D.E. Jr.;
"Active site water molecules revealed in the 2.1 A resolution structure of a site-directed mutant of isocitrate dehydrogenase.";
J. Mol. Biol. 295:377-385(2000).
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[13]
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X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) OF MUTANT GLU-113 IN COMPLEX WITH SUBSTRATE ANALOG; MAGNESIUM AND NADP.
DOI=10.1021/bi002533q; PubMed=11284679 [NCBI, ExPASy, EBI, Israel, Japan]
Doyle S.A.,
Beernink P.T.,
Koshland D.E. Jr.;
"Structural basis for a change in substrate specificity: crystal structure of S113E isocitrate dehydrogenase in a complex with isopropylmalate, Mg2+, and NADP.";
Biochemistry 40:4234-4241(2001).
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