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UniProtKB/Swiss-Prot entry A5N0Z3

[Entry info] [Name and origin] [References] [Comments] [Cross-references] [Keywords] [Features] [Sequence] [Tools]

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Entry information
Entry name DEOC_CLOK5
Primary accession number A5N0Z3
Secondary accession numbers None
Integrated into Swiss-Prot on May 20, 2008
Sequence was last modified on July 10, 2007 (Sequence version 1)
Annotations were last modified on    September 2, 2008 (Entry version 16)
Name and origin of the protein
Protein name Deoxyribose-phosphate aldolase
Synonyms EC 4.1.2.4
Phosphodeoxyriboaldolase
Deoxyriboaldolase
DERA
Gene name
Name: deoC
OrderedLocusNames: CKL_2777
From
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [TaxID: 431943] [HAMAP proteome]
Taxonomy Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Protein existence 3: Inferred from homology;
References
[1]
 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
DOI=10.1073/pnas.0711093105; PubMed=18218779 [NCBI, ExPASy, EBI, Israel, Japan]
Seedorf H., Fricke W.F., Veith B., Brueggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G.;
"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.";
Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008).
Comments
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms. Distributed under the Creative Commons Attribution-NoDerivs License.
Cross-references
Sequence databases
EMBL
CP000673; EDK34789.1; -; Genomic_DNA.[EMBL / GenBank / DDBJ] [CoDingSequence]
RefSeq YP_001396160.1; -.
3D structure databases
ModBase A5N0Z3.
Ontologies
GO
GO:0005737; Cellular component: cytoplasm (inferred from electronic annotation from HAMAP).
GO:0004139; Molecular function: deoxyribose-phosphate aldolase activity (inferred from electronic annotation from HAMAP).
GO:0016052; Biological process: carbohydrate catabolic process (inferred from electronic annotation from HAMAP).
QuickGo view.
Family and domain databases
HAMAP MF_00114; -; 1.
PBIL [Tree]
InterPro IPR011343; DeoC.
IPR002915; DeoC/AroFGH_arch.
Graphical view of domain structure.
PANTHER PTHR10889; DeoC; 1.
Pfam PF01791; DeoC; 1.
Pfam graphical view of domain structure.
PIRSF PIRSF001357; DeoC; 1.
TIGRFAMs TIGR00126; deoC; 1.
BLOCKS A5N0Z3.
ProtoNet A5N0Z3.
Genome annotation databases
GeneID 5392484; -.
GenomeReviews CP000673_GR; CKL_2777.
KEGG ckl:CKL_2777; -.
NMPDR fig|431943.4.peg.2826; -.
CMR A5N0Z3; CKL_2777.
Other
UniRef View cluster of proteins with at least 50% / 90% / 100% identity.
Keywords
Complete proteome; Cytoplasm; Lyase; Schiff base.
Features
SEVIEWER logo Feature table viewer
KeyFrom   To Length Description FTId
CHAIN   1   218  218     Deoxyribose-phosphate aldolase. PRO_1000076028
ACT_SITE   155   155        Schiff-base intermediate with acetaldehyde (By similarity). 
ACT_SITE   184   184        By similarity. 
Sequence information
Length: 218 AA [This is the length of the unprocessed precursor] Molecular weight: 23545 Da [This is the MW of the unprocessed precursor] CRC64: A47504B5AB52B1CB [This is a checksum on the sequence] 
        10         20         30         40         50         60 
MDKKELAKMI DHTLLKPEAN YEQIVKLCKE ALEYGFASVC INPCYVNAAY QLLKGSDVKV 

        70         80         90        100        110        120 
CTVVGFPLGA ATSETKTFEA VQAVNRGASE IDMVINVGYL KSGNHDYVEE DIKTLVNKIN 

       130        140        150        160        170        180 
GRALVKVIIE TCLLNDEEKI IACKLAKKAG AHFVKTSTGF NMSGATSEDV ALMYDAVSPN 

       190        200        210 
LKVKASGGIR TYEDAIKMIN AGASRIGASS SIKIINKK
A5N0Z3 in FASTA format

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