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HAMAP proteomes: Bacteria


Proteomes by kingdom: [Summary] Bacteria Archaea Plastids

The UniProt Knowledgebase currently contains 933 complete proteomes of the kingdom Bacteria that are covered by the HAMAP project. Whole-genome shotgun (WGS) and draft sequences are not covered by the HAMAP project. Only closed genomes are entered into the HAMAP database and are considered for annotation.

To retrieve information from a particular organism (description, genome reference paper(s), taxonomy or a file containing all the UniProt Knowledgebase entries)
or to perform a BLAST search against all potential proteins from this organism, click on the species code.

UniProtKB/Swiss-Prot Release 57.15 of 02-Mar-2010
UniProtKB/TrEMBL Release 40.15 of 02-Mar-2010

Statistics
Species
Species code

Total number
of entries
Number of UniProtKB/
Swiss-Prot entries
Number of UniProtKB/
TrEMBL entries
Status in UniProtKB/
Swiss-Prot






Acaryochloris marina (strain MBIC 11017) ACAM1 8172 319 7853
   3%
Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) ACEP3 2907 3 2904
0%
Acholeplasma laidlawii (strain PG-8A) ACHLI 1380 145 1235
   10%
Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) ACIFD 1935 0 1935
0%
Acidiphilium cryptum (strain JF-5) ACICJ 3521 260 3261
   7%
Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) ACIF2 3120 209 2911
   6%
Acidithiobacillus ferrooxidans (strain ATCC 53993) ACIF5 2747 207 2540
   7%
Acidobacteria bacterium (strain Ellin345) ACIBL 4771 250 4521
   5%
Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) ACIC5 3363 140 3223
   4%
Acidothermus cellulolyticus (strain ATCC 43068 / 11B) ACIC1 2157 201 1956
   9%
Acidovorax avenae subsp. citrulli (strain AAC00-1) ACIAC 4602 314 4288
   6%
Acidovorax sp. (strain JS42) ACISJ 4045 303 3742
   7%
Acinetobacter baumannii (strain AB0057) ACIB5 3732 288 3444
   7%
Acinetobacter baumannii (strain AB307-0294) ACIB3 3453 291 3162
   8%
Acinetobacter baumannii (strain ACICU) ACIBC 3745 293 3452
   7%
Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) ACIBT 3798 306 3492
   8%
Acinetobacter baumannii (strain AYE) ACIBY 3652 309 3343
   8%
Acinetobacter baumannii (strain SDF) ACIBS 2767 303 2464
   10%
Acinetobacter sp. (strain ADP1) ACIAD 3293 466 2827
   14%
Actinobacillus pleuropneumoniae serotype 3 (strain JL03) ACTPJ 2026 376 1650
   18%
Actinobacillus pleuropneumoniae serotype 5b (strain L20) ACTP2 2004 423 1581
   21%
Actinobacillus pleuropneumoniae serotype 7 (strain AP76) ACTP7 2113 379 1734
   17%
Actinobacillus succinogenes (strain ATCC 55618 / 130Z) ACTSZ 2077 395 1682
   19%
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) ACTMD 6912 1 6911
0%
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) AERHH 4121 455 3666
   11%
Aeromonas salmonicida (strain A449) AERS4 4303 447 3856
   10%
Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) AGGAD 2129 0 2129
0%
Aggregatibacter aphrophilus (strain NJ8700) AGGAN 2224 6 2218
0%
Agrobacterium radiobacter (strain K84 / ATCC BAA-868) AGRRK 6675 273 6402
   4%
Agrobacterium tumefaciens (strain C58 / ATCC 33970) AGRT5 5344 617 4727
   11%
Agrobacterium vitis (strain S4 / ATCC BAA-846) AGRVS 5353 281 5072
   5%
Akkermansia muciniphila (strain ATCC BAA-835) AKKM8 2137 129 2008
   6%
Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) ALCBS 2752 366 2386
   13%
Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) ALIAD 3059 2 3057
0%
Aliivibrio salmonicida (strain LFI1238) ALISL 3513 422 3091
   12%
Alkalilimnicola ehrlichei (strain MLHE-1) ALHEH 2862 367 2495
   12%
Alkaliphilus metalliredigens (strain QYMF) ALKMQ 4467 304 4163
   6%
Alkaliphilus oremlandii (strain OhILAs) ALKOO 2828 267 2561
   9%
Alteromonas macleodii (strain DSM 17117 / Deep ecotype) ALTMD 4049 251 3798
   6%
Ammonifex degensii (strain DSM 10501 / KC4) AMMDK 2049 0 2049
0%
Amoebophilus asiaticus (strain 5a2) AMOA5 1253 112 1141
   8%
Anabaena sp. (strain PCC 7120) ANASP 6070 676 5394
   11%
Anabaena variabilis (strain ATCC 29413 / PCC 7937) ANAVT 5634 462 5172
   8%
Anaerocellum thermophilum (strain DSM 6725 / Z-1320) ANATD 2652 209 2443
   7%
Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) ANAPD 1795 0 1795
0%
Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) ANAD2 4461 232 4229
   5%
Anaeromyxobacter dehalogenans (strain 2CP-C) ANADE 4345 309 4036
   7%
Anaeromyxobacter sp. (strain Fw109-5) ANADF 4461 249 4212
   5%
Anaeromyxobacter sp. (strain K) ANASK 4444 244 4200
   5%
Anaplasma centrale (strain Israel) ANACI 919 0 919
0%
Anaplasma marginale (strain Florida) ANAMF 939 110 829
   11%
Anaplasma marginale (strain St. Maries) ANAMM 945 192 753
   20%
Anaplasma phagocytophilum (strain HZ) ANAPZ 1244 160 1084
   12%
Anoxybacillus flavithermus (strain DSM 21510 / WK1) ANOFW 2819 222 2597
   7%
Aquifex aeolicus AQUAE 1552 773 779
   49%
Arcobacter butzleri (strain RM4018) ARCB4 2254 226 2028
   10%
Arthrobacter aurescens (strain TC1) ARTAT 4564 201 4363
   4%
Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) ARTCA 4587 169 4418
   3%
Arthrobacter sp. (strain FB24) ARTS2 4453 215 4238
   4%
Aster yellows witches'-broom phytoplasma (strain AYWB) AYWBP 690 124 566
   17%
Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) ATOPD 1353 0 1353
0%
Azoarcus sp. (strain BH72) AZOSB 3981 369 3612
   9%
Azoarcus sp. (strain EbN1) AZOSE 4494 406 4088
   9%
Azobacteroides pseudotrichonymphae genomovar. CFP2 AZOPC 847 138 709
   16%
Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) AZOC5 4708 294 4414
   6%
Azotobacter vinelandii (strain DJ / ATCC BAA-1303) AZOVD 4990 361 4629
   7%
Bacillus amyloliquefaciens (strain FZB42) BACA2 3692 488 3204
   13%
Bacillus anthracis BACAN 5486 718 4768
   13%
Bacillus anthracis (strain A0248) BACAA 5291 405 4886
   7%
Bacillus anthracis (strain CDC 684 / NRRL 3495) BACAC 5895 410 5485
   6%
Bacillus cereus (strain 03BB102) BACC3 5598 410 5188
   7%
Bacillus cereus (strain AH187) BACC7 5747 412 5335
   7%
Bacillus cereus (strain AH820) BACC0 5798 402 5396
   6%
Bacillus cereus (strain ATCC 10987) BACC1 5821 590 5231
   10%
Bacillus cereus (strain ATCC 14579 / DSM 31) BACCR 5240 638 4602
   12%
Bacillus cereus (strain B4264) BACC4 5384 413 4971
   7%
Bacillus cereus (strain G9842) BACC2 5844 409 5435
   6%
Bacillus cereus (strain Q1) BACCQ 5459 381 5078
   6%
Bacillus cereus (strain ZK / E33L) BACCZ 5638 560 5078
   9%
Bacillus cereus subsp. cytotoxis (strain NVH 391-98) BACCN 3840 432 3408
   11%
Bacillus clausii (strain KSM-K16) BACSK 4082 496 3586
   12%
Bacillus halodurans BACHD 4006 730 3276
   18%
Bacillus licheniformis (strain DSM 13 / ATCC 14580) BACLD 4179 555 3624
   13%
Bacillus pumilus (strain SAFR-032) BACP2 3675 422 3253
   11%
Bacillus subtilis BACSU 4185 4185 0
Complete
Bacillus thuringiensis (strain Al Hakam) BACAH 4792 392 4400
   8%
Bacillus thuringiensis subsp. konkukian BACHK 5169 565 4604
   10%
Bacillus weihenstephanensis (strain KBAB4) BACWK 5650 434 5216
   7%
Bacteroides fragilis BACFR 4597 333 4264
   7%
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) BACFN 4234 309 3925
   7%
Bacteroides thetaiotaomicron BACTN 4773 350 4423
   7%
Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) BACV8 3982 259 3723
   6%
Bartonella bacilliformis (strain ATCC 35685 / KC583) BARBK 1255 257 998
   20%
Bartonella grahamii (strain as4aup) BARGA 1709 3 1706
0%
Bartonella henselae (Rochalimaea henselae) BARHE 1466 322 1144
   21%
Bartonella quintana (Rochalimaea quintana) BARQU 1139 312 827
   27%
Bartonella tribocorum (strain CIP 105476 / IBS 506) BART1 1962 259 1703
   13%
Baumannia cicadellinicola subsp. Homalodisca coagulata BAUCH 595 265 330
   44%
Bdellovibrio bacteriovorus BDEBA 3583 272 3311
   7%
Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) BEII9 3774 224 3550
   5%
Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) BEUC1 4195 127 4068
   3%
Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) BIFAA 1628 181 1447
   11%
Bifidobacterium animalis subsp. lactis (strain AD011) BIFA0 1525 141 1384
   9%
Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) BIFLB 1566 1 1565
0%
Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) BIFAS 1565 3 1562
0%
Bifidobacterium longum BIFLO 1724 292 1432
   16%
Bifidobacterium longum (strain DJO10A) BIFLD 1980 190 1790
   9%
Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) BIFLI 2399 185 2214
   7%
Blattabacterium sp. subsp. Blattella germanica (strain Bge) BLASB 586 0 586
0%
Blattabacterium sp. subsp. Periplaneta americana (strain BPLAN) BLASP 581 0 581
0%
Blochmannia floridanus BLOFL 583 283 300
   48%
Blochmannia pennsylvanicus (strain BPEN) BLOPB 610 273 337
   44%
Bordetella avium (strain 197N) BORA1 3372 362 3010
   10%
Bordetella bronchiseptica (Alcaligenes bronchisepticus) BORBR 4961 519 4442
   10%
Bordetella parapertussis BORPA 4161 506 3655
   12%
Bordetella pertussis BORPE 3261 504 2757
   15%
Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) BORPD 4912 304 4608
   6%
Borrelia afzelii (strain PKo) BORAP 1262 191 1071
   15%
Borrelia burgdorferi (Lyme disease spirochete) BORBU 1556 420 1136
   26%
Borrelia burgdorferi (strain ZS7) BORBZ 1223 159 1064
   13%
Borrelia duttonii (strain Ly) BORDL 1287 119 1168
   9%
Borrelia garinii BORGA 1262 202 1060
   16%
Borrelia hermsii (strain DAH) BORHD 819 125 694
   15%
Borrelia recurrentis (strain A1) BORRA 977 116 861
   11%
Borrelia turicatae (strain 91E135) BORT9 818 115 703
   14%
Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) BRAFD 3062 0 3062
0%
Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) BRAHW 2642 110 2532
   4%
Bradyrhizobium japonicum BRAJA 8253 642 7611
   7%
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) BRASB 7567 338 7229
   4%
Bradyrhizobium sp. (strain ORS278) BRASO 6701 323 6378
   4%
Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) BREBN 5887 244 5643
   4%
Brucella abortus BRUAB 3077 498 2579
   16%
Brucella abortus (strain 2308) BRUA2 3022 472 2550
   15%
Brucella abortus (strain S19) BRUA1 2993 320 2673
   10%
Brucella canis (strain ATCC 23365 / NCTC 10854) BRUC2 3238 364 2874
   11%
Brucella melitensis BRUME 3178 572 2606
   17%
Brucella melitensis biotype 2 (strain ATCC 23457) BRUMB 3125 316 2809
   10%
Brucella microti (strain CCM 4915) BRUMC 3270 0 3270
0%
Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) BRUO2 2820 336 2484
   11%
Brucella suis BRUSU 3256 576 2680
   17%
Brucella suis (strain ATCC 23445 / NCTC 10510) BRUSI 3214 361 2853
   11%
Buchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) BUCAI 572 572 0
Complete
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) BUCA5 555 249 306
   44%
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) BUCAT 553 247 306
   44%
Buchnera aphidicola subsp. Baizongia pistaciae BUCBP 507 507 0
Complete
Buchnera aphidicola subsp. Cinara cedri BUCCC 362 146 216
   40%
Buchnera aphidicola subsp. Schizaphis graminum BUCAP 562 562 0
Complete
Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) BURCM 6600 390 6210
   5%
Burkholderia ambifaria (strain MC40-6) BURA4 6690 354 6336
   5%
Burkholderia cenocepacia (strain AU 1054) BURCA 6450 419 6031
   6%
Burkholderia cenocepacia (strain HI2424) BURCH 6898 401 6497
   5%
Burkholderia cenocepacia (strain MC0-3) BURCC 6986 359 6627
   5%
Burkholderia cepacia (strain J2315 / LMG 16656) BURCJ 6993 336 6657
   4%
Burkholderia glumae (strain BGR1) BURGB 5660 0 5660
0%
Burkholderia mallei (Pseudomonas mallei) BURMA 4797 461 4336
   9%
Burkholderia mallei (strain NCTC 10229) BURM9 4957 351 4606
   7%
Burkholderia mallei (strain NCTC 10247) BURM7 5182 356 4826
   6%
Burkholderia mallei (strain SAVP1) BURMS 4981 344 4637
   6%
Burkholderia multivorans (strain ATCC 17616 / 249) BURM1 6189 331 5858
   5%
Burkholderia phymatum (strain DSM 17167 / STM815) BURP8 7461 331 7130
   4%
Burkholderia phytofirmans (strain DSM 17436 / PsJN) BURPP 7197 335 6862
   4%
Burkholderia pseudomallei (Pseudomonas pseudomallei) BURPS 5717 486 5231
   8%
Burkholderia pseudomallei (strain 1106a) BURP0 7145 373 6772
   5%
Burkholderia pseudomallei (strain 1710b) BURP1 6329 411 5918
   6%
Burkholderia pseudomallei (strain 668) BURP6 7102 362 6740
   5%
Burkholderia sp. (strain 383) BURS3 7715 472 7243
   6%
Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) BURTA 5561 414 5147
   7%
Burkholderia vietnamiensis (strain G4 / LMG 22486) BURVG 7409 377 7032
   5%
Burkholderia xenovorans (strain LB400) BURXL 8591 438 8153
   5%
Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) CALS8 2625 250 2375
   9%
Campylobacter concisus (strain 13826) CAMC1 2063 227 1836
   11%
Campylobacter curvus (strain 525.92) CAMC5 1928 214 1714
   11%
Campylobacter fetus subsp. fetus (strain 82-40) CAMFF 1715 233 1482
   13%
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) CAMHC 1687 229 1458
   13%
Campylobacter jejuni CAMJE 1623 430 1193
   26%
Campylobacter jejuni (strain RM1221) CAMJR 1836 332 1504
   18%
Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) CAMJD 1712 282 1430
   16%
Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) CAMJJ 1748 307 1441
   17%
Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) CAMJ8 1622 306 1316
   18%
Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) CAMLR 1545 190 1355
   12%
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) CAPOD 2171 0 2171
0%
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) CARHZ 2615 345 2270
   13%
Carsonella ruddii (strain PV) CARRP 182 28 154
   15%
Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) CATAD 8909 0 8909
0%
Caulobacter crescentus (Caulobacter vibrioides) CAUCR 3718 545 3173
   14%
Caulobacter crescentus (strain NA1000 / CB15N) CAUCN 3852 309 3543
   8%
Caulobacter sp. (strain K31) CAUSK 5373 273 5100
   5%
Cellvibrio japonicus (strain Ueda107) CELJU 3712 244 3468
   6%
Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) CHIPD 7179 0 7179
0%
Chlamydia muridarum CHLMU 916 412 504
   44%
Chlamydia pneumoniae (Chlamydophila pneumoniae) CHLPN 1052 422 630
   40%
Chlamydia trachomatis CHLTR 895 410 485
   45%
Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) CHLTA 917 237 680
   25%
Chlamydia trachomatis (strain B/Jali20/OT) CHLTJ 883 2 881
0%
Chlamydia trachomatis (strain B/TZ1A828/OT) CHLTZ 888 0 888
0%
Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) CHLT2 884 224 660
   25%
Chlamydia trachomatis (strain L2b/UCH-1/proctitis) CHLTB 883 209 674
   23%
Chlamydophila abortus CHLAB 932 235 697
   25%
Chlamydophila caviae CHLCV 1005 268 737
   26%
Chlamydophila felis (strain Fe/C-56) CHLFF 1013 225 788
   22%
Chlamydophila pneumoniae (strain LPCoLN) CHLPP 1105 0 1105
0%
Chlorobaculum parvum (strain NCIB 8327) CHLP8 2044 263 1781
   12%
Chlorobium chlorochromatii (strain CaD3) CHLCH 1991 295 1696
   14%
Chlorobium limicola (strain DSM 245 / NBRC 103803) CHLL2 2419 237 2182
   9%
Chlorobium phaeobacteroides (strain BS1) CHLPB 2434 222 2212
   9%
Chlorobium phaeobacteroides (strain DSM 266) CHLPD 2579 276 2303
   10%
Chlorobium tepidum CHLTE 2250 413 1837
   18%
Chloroflexus aggregans (strain MD-66 / DSM 9485) CHLAD 3725 181 3544
   4%
Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) CHLSY 4153 180 3973
   4%
Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) CHLAA 3850 227 3623
   5%
Chloroherpeton thalassium (strain ATCC 35110 / GB-78) CHLT3 2708 206 2502
   7%
Chromobacterium violaceum CHRVO 4400 510 3890
   11%
Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) CHRSD 3298 398 2900
   12%
Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) CITK8 5019 664 4355
   13%
Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) CLAM3 3078 190 2888
   6%
Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) CLAMS 3057 168 2889
   5%
Clostridium acetobutylicum CLOAB 3847 541 3306
   14%
Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) CLOB8 5003 320 4683
   6%
Clostridium botulinum (strain 657 / Type Ba4) CLOB6 3977 254 3723
   6%
Clostridium botulinum (strain Alaska E43 / Type E3) CLOBA 3254 290 2964
   8%
Clostridium botulinum (strain ATCC 19397 / Type A) CLOB1 3546 310 3236
   8%
Clostridium botulinum (strain Eklund 17B / Type B) CLOBB 3473 284 3189
   8%
Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) CLOBH 3590 285 3305
   7%
Clostridium botulinum (strain Kyoto / Type A2) CLOBJ 3860 258 3602
   6%
Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) CLOBL 3653 311 3342
   8%
Clostridium botulinum (strain Loch Maree / Type A3) CLOBM 3981 284 3697
   7%
Clostridium botulinum (strain Okra / Type B1) CLOBK 3844 287 3557
   7%
Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) CLOCE 3287 204 3083
   6%
Clostridium difficile (strain 630) CLOD6 3712 285 3427
   7%
Clostridium difficile (strain CD196) CLODC 3453 0 3453
0%
Clostridium difficile (strain R20291) CLODR 3505 0 3505
0%
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) CLOK5 3828 283 3545
   7%
Clostridium kluyveri (strain NBRC 12016) CLOK1 3496 212 3284
   6%
Clostridium novyi (strain NT) CLONN 2305 305 2000
   13%
Clostridium perfringens CLOPE 2721 467 2254
   17%
Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) CLOP1 2873 356 2517
   12%
Clostridium perfringens (strain SM101 / Type A) CLOPS 2558 338 2220
   13%
Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) CLOPH 3891 252 3639
   6%
Clostridium tetani CLOTE 2414 328 2086
   13%
Clostridium thermocellum (strain ATCC 27405 / DSM 1237) CLOTH 3102 291 2811
   9%
Colwellia psychrerythraea (strain 34H / ATCC BAA-681) COLP3 4872 432 4440
   8%
Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) COPPD 1481 100 1381
   6%
Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) CORA7 2508 154 2354
   6%
Corynebacterium diphtheriae CORDI 2264 328 1936
   14%
Corynebacterium efficiens COREF 2945 404 2541
   13%
Corynebacterium glutamicum (Brevibacterium flavum) CORGL 3093 478 2615
   15%
Corynebacterium glutamicum (strain R) CORGB 3078 286 2792
   9%
Corynebacterium jeikeium (strain K411) CORJK 2064 267 1797
   12%
Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) CORK4 2018 119 1899
   5%
Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) CORU7 2011 144 1867
   7%
Coxiella burnetii COXBU 1815 386 1429
   21%
Coxiella burnetii (strain CbuG_Q212) COXB2 1831 221 1610
   12%
Coxiella burnetii (strain CbuK_Q154) COXB1 1915 221 1694
   11%
Coxiella burnetii (strain Dugway 5J108-111) COXBN 2029 290 1739
   14%
Coxiella burnetii (strain RSA 331 / Henzerling II) COXBR 1891 283 1608
   14%
Cronobacter turicensis (strain DSM 18703 / LMG 23827 / z3032) CROTZ 4455 0 4455
0%
Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) CRYCD 1355 0 1355
0%
Cupriavidus taiwanensis (strain R1 / LMG 19424) CUPTR 5838 314 5524
   5%
Cyanothece sp. (strain ATCC 51142) CYAA5 5239 237 5002
   4%
Cyanothece sp. (strain PCC 7424) CYAP7 5656 271 5385
   4%
Cyanothece sp. (strain PCC 7425 / ATCC 29141) CYAP4 5232 234 4998
   4%
Cyanothece sp. (strain PCC 8801) CYAP8 4335 261 4074
   6%
Cyanothece sp. (strain PCC 8802) CYAP0 4405 0 4405
0%
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) CYTH3 3771 245 3526
   6%
Dechloromonas aromatica (strain RCB) DECAR 4155 441 3714
   10%
Dehalococcoides ethenogenes (strain 195) DEHE1 1502 238 1264
   15%
Dehalococcoides sp. (strain BAV1) DEHSB 1355 200 1155
   14%
Dehalococcoides sp. (strain CBDB1) DEHSC 1454 238 1216
   16%
Dehalococcoides sp. (strain VS) DEHSV 1426 0 1426
0%
Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) DEIDV 3446 164 3282
   4%
Deinococcus geothermalis (strain DSM 11300) DEIGD 2813 259 2554
   9%
Deinococcus radiodurans DEIRA 3085 491 2594
   15%
Delftia acidovorans (strain DSM 14801 / SPH-1) DELAS 5968 245 5723
   4%
Desulfatibacillum alkenivorans (strain AK-01) DESAA 5195 176 5019
   3%
Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) DESHD 4852 244 4608
   5%
Desulfitobacterium hafniense (strain Y51) DESHY 5014 310 4704
   6%
Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) DESAH 4782 156 4626
   3%
Desulfococcus oleovorans (strain DSM 6200 / Hxd3) DESOH 3255 189 3066
   5%
Desulfohalobium retbaense (strain DSM 5692) DESRD 2455 0 2455
0%
Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) DESBD 3421 0 3421
0%
Desulforudis audaxviator (strain MP104C) DESAP 2136 202 1934
   9%
Desulfotalea psychrophila DESPS 3233 317 2916
   9%
Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) DESAS 4016 0 4016
0%
Desulfotomaculum reducens (strain MI-1) DESRM 3220 281 2939
   8%
Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) DESDA 2345 192 2153
   8%
Desulfovibrio desulfuricans (strain G20) DESDG 3733 295 3438
   7%
Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) DESMR 4664 163 4501
   3%
Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) DESAD 3807 194 3613
   5%
Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) DESVH 3517 364 3153
   10%
Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) DESVM 3178 220 2958
   6%
Desulfovibrio vulgaris subsp. vulgaris (strain DP4) DESVV 3085 276 2809
   8%
Diaphorobacter sp. (strain TPSY) DIAST 3461 248 3213
   7%
Dichelobacter nodosus (strain VCS1703A) DICNV 1273 226 1047
   17%
Dickeya dadantii (strain Ech586) DICD5 4141 0 4141
0%
Dickeya dadantii (strain Ech703) DICDC 3961 7 3954
0%
Dickeya zeae (strain Ech1591) DICZE 4131 8 4123
0%
Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) DICT6 1913 154 1759
   8%
Dictyoglomus turgidum (strain Z-1310 / DSM 6724) DICTD 1743 146 1597
   8%
Dinoroseobacter shibae (strain DFL 12) DINSH 4086 274 3812
   6%
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) DYAFD 5703 1 5702
0%
Edwardsiella ictaluri (strain 93-146) EDWI9 3725 408 3317
   10%
Edwardsiella tarda (strain EIB202) EDWTE 3568 0 3568
0%
Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) EGGLE 3054 0 3054
0%
Ehrlichia canis (strain Jake) EHRCJ 921 189 732
   20%
Ehrlichia chaffeensis (strain Arkansas) EHRCR 1099 185 914
   16%
Ehrlichia ruminantium (strain Gardel) EHRRG 948 186 762
   19%
Ehrlichia ruminantium (strain Welgevonden) EHRRW 886 184 702
   20%
Elusimicrobium minutum (strain Pei191) ELUMP 1528 114 1414
   7%
Enterobacter sakazakii (strain ATCC BAA-894) ENTS8 4421 608 3813
   13%
Enterobacter sp. (strain 638) ENT38 4236 697 3539
   16%
Enterococcus faecalis (Streptococcus faecalis) ENTFA 3240 448 2792
   13%
Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) ERWCT 4459 777 3682
   17%
Erwinia tasmaniensis (strain DSM 17950 / Et1/99) ERWT9 3618 523 3095
   14%
Erythrobacter litoralis (strain HTCC2594) ERYLH 2999 230 2769
   7%
Escherichia coli (strain 55989 / EAEC) ECO55 4797 757 4040
   15%
Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 / DH1) ECOD1 4124 0 4124
0%
Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) ECOLC 4173 814 3359
   19%
Escherichia coli (strain B / BL21) ECOBB 4021 9 4012
0%
Escherichia coli (strain B / BL21-DE3) ECOBD 4156 0 4156
0%
Escherichia coli (strain B / REL606) ECOBR 4143 9 4134
0%
Escherichia coli (strain K12 / BW2952) ECOBW 4042 759 3283
   18%
Escherichia coli (strain K12 / DH10B) ECODH 3990 765 3225
   19%
Escherichia coli (strain K12) ECOLI 4364 4364 0
Complete
Escherichia coli (strain SE11) ECOSE 4983 750 4233
   15%
Escherichia coli (strain SMS-3-5 / SECEC) ECOSM 4877 785 4092
   16%
Escherichia coli (strain UTI89 / UPEC) ECOUT 5193 818 4375
   15%
Escherichia coli O103:H2 (strain 12009 / EHEC) ECO10 4964 0 4964
0%
Escherichia coli O111:H- (strain 11128 / EHEC) ECO1A 5238 0 5238
0%
Escherichia coli O127:H6 (strain E2348/69 / EPEC) ECO27 4594 759 3835
   16%
Escherichia coli O139:H28 (strain E24377A / ETEC) ECO24 4915 829 4086
   16%
Escherichia coli O157:H7 ECO57 5272 1992 3280
   37%
Escherichia coli O157:H7 (strain EC4115 / EHEC) ECO5E 5279 742 4537
   14%
Escherichia coli O157:H7 (strain TW14359 / EHEC) ECO5T 5255 4 5251
0%
Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) ECOLU 4977 757 4220
   15%
Escherichia coli O1:K1 / APEC ECOK1 4870 706 4164
   14%
Escherichia coli O26:H11 (strain 11368 / EHEC) ECO26 5326 0 5326
0%
Escherichia coli O45:K1 (strain S88 / ExPEC) ECO45 4805 751 4054
   15%
Escherichia coli O6 ECOL6 5336 1667 3669
   31%
Escherichia coli O6:K15:H31 (strain 536 / UPEC) ECOL5 4605 879 3726
   19%
Escherichia coli O7:K1 (strain IAI39 / ExPEC) ECO7I 4554 748 3806
   16%
Escherichia coli O8 (strain IAI1) ECO8A 4331 756 3575
   17%
Escherichia coli O81 (strain ED1a) ECO81 4940 726 4214
   14%
Escherichia coli O9:H4 (strain HS) ECOHS 4310 835 3475
   19%
Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) ESCF3 4312 684 3628
   15%
Eubacterium eligens (strain ATCC 27750 / VPI C15-48) EUBE2 2761 117 2644
   4%
Eubacterium rectale (strain ATCC 33656 / VPI 0990) EUBR3 3545 121 3424
   3%
Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) EXIS2 3005 286 2719
   9%
Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) EXISA 3020 218 2802
   7%
Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) FERNB 1725 175 1550
   10%
Fibrobacter succinogenes (strain ATCC 19169 / S85) FIBSS 3084 6 3078
0%
Finegoldia magna (strain ATCC 29328) FINM2 1813 169 1644
   9%
Flavobacteriaceae bacterium (strain 3519-10) FLAB3 2533 2 2531
0%
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) FLAJ1 5016 232 4784
   4%
Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) FLAPJ 2408 213 2195
   8%
Francisella philomiragia subsp. philomiragia (strain ATCC 25017) FRAP2 1875 249 1626
   13%
Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) FRATF 1515 258 1257
   17%
Francisella tularensis subsp. holarctica (strain LVS) FRATH 1678 286 1392
   17%
Francisella tularensis subsp. holarctica (strain OSU18) FRATO 1510 270 1240
   17%
Francisella tularensis subsp. mediasiatica (strain FSC147) FRATM 1388 238 1150
   17%
Francisella tularensis subsp. novicida (strain U112) FRATN 1719 275 1444
   15%
Francisella tularensis subsp. tularensis FRATT 1528 290 1238
   18%
Francisella tularensis subsp. tularensis (strain FSC 198) FRAT1 1528 271 1257
   17%
Francisella tularensis subsp. tularensis (strain NE061598) FRATE 1709 0 1709
0%
Francisella tularensis subsp. tularensis (strain WY96-3418) FRATW 1573 258 1315
   16%
Frankia alni (strain ACN14a) FRAAA 6711 197 6514
   2%
Frankia sp. (strain CcI3) FRASC 4442 250 4192
   5%
Frankia sp. (strain EAN1pec) FRASN 7133 167 6966
   2%
Fusobacterium nucleatum subsp. nucleatum FUSNN 2046 340 1706
   16%
Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GEMAT 3932 92 3840
   2%
Geobacillus kaustophilus GEOKA 3516 504 3012
   14%
Geobacillus sp. (strain WCH70) GEOSW 3048 344 2704
   11%
Geobacillus sp. (strain Y412MC61) GEOSY 3414 0 3414
0%
Geobacillus thermodenitrificans (strain NG80-2) GEOTN 3424 408 3016
   11%
Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GEOBB 4009 262 3747
   6%
Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GEOLS 3644 249 3395
   6%
Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GEOMG 3467 358 3109
   10%
Geobacter sp. (strain FRC-32) GEOSF 3797 238 3559
   6%
Geobacter sp. (strain M21) GEOSM 4068 241 3827
   5%
Geobacter sulfurreducens GEOSL 3415 393 3022
   11%
Geobacter uraniireducens (strain Rf4) GEOUR 4255 295 3960
   6%
Gloeobacter violaceus GLOVI 4406 428 3978
   9%
Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GLUDA 3788 202 3586
   5%
Gluconobacter oxydans (Gluconobacter suboxydans) GLUOX 2626 320 2306
   12%
Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) GORB4 4548 0 4548
0%
Gramella forsetii (strain KT0803) GRAFK 3554 204 3350
   5%
Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GRABC 2435 256 2179
   10%
Haemophilus ducreyi HAEDU 1694 504 1190
   29%
Haemophilus influenzae HAEIN 1709 1709 0
Complete
Haemophilus influenzae (strain 86-028NP) HAEI8 1792 492 1300
   27%
Haemophilus influenzae (strain PittEE) HAEIE 1615 423 1192
   26%
Haemophilus influenzae (strain PittGG) HAEIG 1662 392 1270
   23%
Haemophilus parasuis serovar 5 (strain SH0165) HAEPS 1992 288 1704
   14%
Haemophilus somnus (strain 129Pt) HAES1 1793 397 1396
   22%
Haemophilus somnus (strain 2336) HAES2 1971 375 1596
   19%
Hahella chejuensis (strain KCTC 2396) HAHCH 6752 443 6309
   6%
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) HALO1 6684 0 6684
0%
Halorhodospira halophila (strain DSM 244 / SL1) HALHL 2406 334 2072
   13%
Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) HALOH 2324 175 2149
   7%
Halothiobacillus neapolitanus (strain ATCC 23641 / c2) HALNC 2353 6 2347
0%
Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) HAMD5 2045 224 1821
   10%
Helicobacter acinonychis (strain Sheeba) HELAH 1596 259 1337
   16%
Helicobacter hepaticus HELHP 1872 319 1553
   17%
Helicobacter pylori (Campylobacter pylori) HELPY 1553 570 983
   36%
Helicobacter pylori (strain 51) HELP1 1412 0 1412
0%
Helicobacter pylori (strain 52) HELP5 1403 0 1403
0%
Helicobacter pylori (strain B38) HELPB 1369 2 1367
0%
Helicobacter pylori (strain G27) HELPG 1501 232 1269
   15%
Helicobacter pylori (strain HPAG1) HELPH 1541 293 1248
   19%
Helicobacter pylori (strain P12) HELP2 1572 256 1316
   16%
Helicobacter pylori (strain Shi470) HELPS 1564 260 1304
   16%
Helicobacter pylori J99 (Campylobacter pylori J99) HELPJ 1488 565 923
   37%
Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) HELMI 2923 217 2706
   7%
Herminiimonas arsenicoxydans HERAR 3274 312 2962
   9%
Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) HERA2 5254 188 5066
   3%
Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) HIRBI 3187 2 3185
0%
Hydrogenobaculum sp. (strain Y04AAS1) HYDS0 1626 149 1477
   9%
Hyphomonas neptunium (strain ATCC 15444) HYPNA 3499 278 3221
   7%
Idiomarina loihiensis IDILO 2608 413 2195
   15%
Jannaschia sp. (strain CCS1) JANSC 4271 324 3947
   7%
Janthinobacterium sp. (strain Marseille) JANMA 3695 316 3379
   8%
Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) JONDD 2495 0 2495
0%
Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) KANKD 2630 1 2629
0%
Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) KINRD 4674 187 4487
   4%
Klebsiella pneumoniae (strain 342) KLEP3 5738 682 5056
   11%
Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) KLEP7 5126 696 4430
   13%
Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) KOCRD 2352 151 2201
   6%
Kosmotoga olearia (strain TBF 19.5.1) KOSOT 2087 125 1962
   5%
Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) KYTSD 2531 0 2531
0%
Lactobacillus acidophilus LACAC 1859 280 1579
   15%
Lactobacillus brevis (strain ATCC 367 / JCM 1170) LACBA 2201 253 1948
   11%
Lactobacillus casei (strain ATCC 334) LACC3 2708 281 2427
   10%
Lactobacillus casei (strain BL23) LACCB 2999 243 2756
   8%
Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) LACDA 1519 239 1280
   15%
Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) LACDB 1682 230 1452
   13%
Lactobacillus fermentum (strain IFO 3956 / LMG 18251) LACF3 1818 225 1593
   12%
Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) LACGA 1694 213 1481
   12%
Lactobacillus helveticus (strain DPC 4571) LACH4 1580 224 1356
   14%
Lactobacillus johnsonii LACJO 1809 292 1517
   16%
Lactobacillus johnsonii (strain FI9785) LACJF 1726 0 1726
0%
Lactobacillus plantarum LACPL 3051 453 2598
   14%
Lactobacillus plantarum (strain JDM1) LACPJ 2948 3 2945
0%
Lactobacillus reuteri (strain DSM 20016) LACRD 1865 244 1621
   13%
Lactobacillus reuteri (strain JCM 1112) LACRJ 1792 230 1562
   12%
Lactobacillus rhamnosus (strain ATCC 53103 / GG) LACRG 2877 0 2877
0%
Lactobacillus rhamnosus (strain Lc 705) LACRL 2952 0 2952
0%
Lactobacillus sakei subsp. sakei (strain 23K) LACSS 1872 313 1559
   16%
Lactobacillus salivarius subsp. salivarius (strain UCC118) LACS1 1998 277 1721
   13%
Lactococcus lactis subsp. cremoris (strain MG1363) LACLM 2383 359 2024
   15%
Lactococcus lactis subsp. cremoris (strain SK11) LACLS 2442 323 2119
   13%
Lactococcus lactis subsp. lactis (strain KF147) LACLK 2458 0 2458
0%
Lactococcus lactis subsp. lactis (Streptococcus lactis) LACLA 2224 527 1697
   23%
Laribacter hongkongensis (strain HLHK9) LARHH 3208 256 2952
   7%
Lawsonia intracellularis (strain PHE/MN1-00) LAWIP 1342 196 1146
   14%
Legionella pneumophila (strain Corby) LEGPC 3202 331 2871
   10%
Legionella pneumophila (strain Lens) LEGPL 2919 379 2540
   12%
Legionella pneumophila (strain Paris) LEGPA 3147 379 2768
   12%
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) LEGPH 2930 372 2558
   12%
Leifsonia xyli subsp. xyli LEIXX 2001 285 1716
   14%
Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) LEPBA 3595 208 3387
   5%
Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) LEPBP 3723 200 3523
   5%
Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) LEPBJ 2829 277 2552
   9%
Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) LEPBL 2872 265 2607
   9%
Leptospira interrogans LEPIN 4690 376 4314
   8%
Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni LEPIC 3654 372 3282
   10%
Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) LEPCP 4343 259 4084
   5%
Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) LEPBD 2218 0 2218
0%
Leuconostoc citreum (strain KM20) LEUCK 1812 192 1620
   10%
Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) LEUMM 2002 227 1775
   11%
Liberibacter asiaticus (strain psy62) LIBAP 1102 1 1101
0%
Listeria innocua LISIN 3018 588 2430
   19%
Listeria monocytogenes LISMO 2844 591 2253
   20%
Listeria monocytogenes serotype 4a (strain HCC23) LISMH 2972 351 2621
   11%
Listeria monocytogenes serotype 4b (strain Clip81459) LISMC 2765 367 2398
   13%
Listeria monocytogenes serotype 4b (strain F2365) LISMF 2818 529 2289
   18%
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) LISW6 2769 406 2363
   14%
Lysinibacillus sphaericus (strain C3-41) LYSSC 4750 254 4496
   5%
Macrococcus caseolyticus (strain JCSC5402) MACCJ 2059 213 1846
   10%
Magnetococcus sp. (strain MC-1) MAGSM 3594 266 3328
   7%
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) MAGSA 4514 301 4213
   6%
Mannheimia succiniciproducens (strain MBEL55E) MANSM 2367 483 1884
   20%
Maricaulis maris (strain MCS10) MARMM 3060 272 2788
   8%
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) MARAV 4170 367 3803
   8%
Marinomonas sp. (strain MWYL1) MARMS 4416 316 4100
   7%
Mesoplasma florum (Acholeplasma florum) MESFL 683 165 518
   24%
Mesorhizobium sp. (strain BNC1) MESSB 4530 344 4186
   7%
Methylacidiphilum infernorum (isolate V4) METI4 2470 108 2362
   4%
Methylibium petroleiphilum (strain PM1) METPP 4359 299 4060
   6%
Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) METFK 2609 360 2249
   13%
Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) METC4 5491 201 5290
   3%
Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) METEA 6233 50 6183
0%
Methylobacterium extorquens (strain DSM 5838 / DM4) METED 5705 4 5701
0%
Methylobacterium extorquens (strain PA1) METEP 4822 200 4622
   4%
Methylobacterium nodulans (strain ORS2060 / LMG 21967) METNO 8128 213 7915
   2%
Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) METPB 5325 216 5109
   4%
Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) METRJ 6388 216 6172
   3%
Methylobacterium sp. (strain 4-46) METS4 6647 230 6417
   3%
Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) METSB 3816 209 3607
   5%
Methylococcus capsulatus METCA 2925 447 2478
   15%
Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) METML 2334 1 2333
0%
Methylovorus sp. (strain SIP3-4) METSD 2907 3 2904
0%
Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) MICLC 2207 131 2076
   5%
Microcystis aeruginosa (strain NIES-843) MICAN 5981 308 5673
   5%
Moorella thermoacetica (strain ATCC 39073) MOOTA 2451 325 2126
   13%
Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) MYCA9 4940 217 4723
   4%
Mycobacterium avium (strain 104) MYCA1 5040 319 4721
   6%
Mycobacterium bovis MYCBO 3910 1208 2702
   30%
Mycobacterium bovis (strain BCG / Pasteur 1173P2) MYCBP 3891 388 3503
   9%
Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) MYCBT 3906 294 3612
   7%
Mycobacterium gilvum (strain PYR-GCK) MYCGI 5499 270 5229
   4%
Mycobacterium leprae MYCLE 1603 661 942
   41%
Mycobacterium leprae (strain Br4923) MYCLB 1599 226 1373
   14%
Mycobacterium marinum (strain ATCC BAA-535 / M) MYCMM 5418 295 5123
   5%
Mycobacterium paratuberculosis MYCPA 4316 436 3880
   10%
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) MYCS2 6597 320 6277
   4%
Mycobacterium sp. (strain JLS) MYCSJ 5695 297 5398
   5%
Mycobacterium sp. (strain KMS) MYCSK 5893 297 5596
   5%
Mycobacterium sp. (strain MCS) MYCSS 5588 304 5284
   5%
Mycobacterium tuberculosis MYCTU 3948 1551 2397
   39%
Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) MYCTA 3990 401 3589
   10%
Mycobacterium tuberculosis (strain KZN 1435 / MDR) MYCTK 4024 1 4023
0%
Mycobacterium ulcerans (strain Agy99) MYCUA 4206 330 3876
   7%
Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) MYCVP 5902 314 5588
   5%
Mycoplasma agalactiae (strain PG2) MYCAP 725 92 633
   12%
Mycoplasma arthritidis (strain 158L3-1) MYCA5 631 84 547
   13%
Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) MYCCT 812 185 627
   22%
Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) MYCCR 695 1 694
0%
Mycoplasma gallisepticum MYCGA 716 187 529
   26%
Mycoplasma genitalium MYCGE 483 483 0
Complete
Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) MYCHP 529 14 515
   2%
Mycoplasma hyopneumoniae (strain 232) MYCH2 691 128 563
   18%
Mycoplasma hyopneumoniae (strain 7448) MYCH7 694 126 568
   18%
Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) MYCHJ 671 126 545
   18%
Mycoplasma mobile MYCMO 628 149 479
   23%
Mycoplasma mycoides subsp. mycoides SC MYCMS 978 166 812
   16%
Mycoplasma penetrans MYCPE 1028 190 838
   18%
Mycoplasma pneumoniae MYCPN 687 687 0
Complete
Mycoplasma pulmonis MYCPU 778 203 575
   26%
Mycoplasma synoviae (strain 53) MYCS5 679 127 552
   18%
Myxococcus xanthus (strain DK 1622) MYXXD 7314 301 7013
   4%
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) NAKMY 5123 0 5123
0%
Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) NATTJ 2847 217 2630
   7%
Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) NAUPA 1730 137 1593
   7%
Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) NEIG1 1963 415 1548
   21%
Neisseria gonorrhoeae (strain NCCP11945) NEIG2 2595 246 2349
   9%
Neisseria meningitidis (strain alpha14) NEIML 1863 0 1863
0%
Neisseria meningitidis serogroup A NEIMA 1887 552 1335
   29%
Neisseria meningitidis serogroup B NEIMB 2001 570 1431
   28%
Neisseria meningitidis serogroup C (strain 053442) NEIM0 1998 305 1693
   15%
Neisseria meningitidis serogroup C (strain 8013) NEIM8 1894 0 1894
0%
Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) NEIMF 1865 374 1491
   20%
Neorickettsia risticii (strain Illinois) NEORI 898 1 897
0%
Neorickettsia sennetsu (strain Miyayama) NEOSM 932 148 784
   15%
Nitratiruptor sp. (strain SB155-2) NITSB 1843 240 1603
   13%