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HAMAP: Psychrobacter sp. (strain PRwf-1) complete proteome

General information

Species:  Psychrobacter sp. (strain PRwf-1)
Species code: PSYWF
Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter (TaxID: 349106) [NEWT/ NCBI]
Description: Psychrobacter sp. (strain PRwf-1) was isolated from the skin and gills of the fish Lutjanus vivanus (silk snapper) caught off the coast of Loiza in northeastern Puerto Rico. It is a small, non-motile coccoid rod often found in pairs. Psychrobacter sp. (strain PRwf-1) was selected for sequencing based on its physiological differences with the Psychrobacter strains isolated from cold environments, including a temperature range shifted to warmer temperatures.
Properties: Presence of flagella: No
Human pathogen: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of PSYWF entries in the UniProt Knowledgebase: 2339 (245 in UniProtKB/Swiss-Prot + 2094 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    PRwf-1
Genome structure:
• Chromosome EMBL accession number CP000713 (circular; 2,978,976 bp) (download entry) (download Genome Reviews).
• Plasmid pRWF101 EMBL accession number CP000714 (circular; 13,956 bp) (download entry) (download Genome Reviews).
• Plasmid pRWF102 EMBL accession number CP000715 (circular; 2,117 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. ;
"Complete sequence of chromosome of Psychrobacter sp. PRwf-1.";
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. ;
"Complete sequence of plasmid pRWF101 of Psychrobacter sp. PRwf-1.";
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
[3] Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P. ;
"Complete sequence of plasmid pRWF102 of Psychrobacter sp. PRwf-1.";
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases.
Web links:
Official genome site(s):
http://genome.jgi-psf.org/finished_microbes/psy_p/psy_p.home.html
Other web sites:
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid349106%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Psyc_PRWF1
 EBI Proteome Analysis page



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