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HAMAP: Methanosarcina mazei (Methanosarcina frisia) complete proteome

General information

Species:  Methanosarcina mazei (Methanosarcina frisia)
Species code: METMA
Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina (TaxID: 2209) [NEWT/ NCBI]
Description: Methanosarcina mazei and related species are of great ecological importance as they are the only organisms fermenting acetate, methylamines and methanol to methane, carbon dioxide and ammonia.
Properties: Presence of flagella: Yes
Human pathogen: No
Interaction: No
Number of membranes: 1
Number of inteins:0
Statistics: Number of METMA entries in the UniProt Knowledgebase: 3303 (455 in UniProtKB/Swiss-Prot + 2848 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11883 / OCM 88
Genome structure:
Chromosome EMBL accession number AE008384 (circular; 4,096,345 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] MEDLINE=22120827; PubMed=12125824; [ NCBI , EBI , Israel , Japan ]
Deppenmeier U., Johann A., Hartsch T., Merkl R., Schmitz R.A., Martinez-Arias R., Henne A., Wiezer A., Baeumer S., Jacobi C., Brueggemann H., Lienard T., Christmann A., Boemecke M., Steckel S., Bhattacharyya A., Lykidis A., Overbeek R., Klenk H.-P., Gunsalus R.P., Fritz H.-J., Gottschalk G. ;
"The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea.";
J. Mol. Microbiol. Biotechnol. 4:453-461(2002).
Web links:
Official genome site(s):
http://www.g2l.bio.uni-goettingen.de/mm/
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Archaea&GLgenus=Methanosarcina&GLspecies=mazei&GLstrain=Goe1
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid192952%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Mmaz_GOE1
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=analysis&Db=p3_p300_Met_mazei
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntmm01
 EBI Proteome Analysis page



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