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HAMAP: Leifsonia xyli subsp. xyli complete proteome

General information

Species:  Leifsonia xyli subsp. xyli
Species code: LEIXX
Taxonomy: Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Leifsonia (TaxID: 59736) [NEWT/ NCBI]
Description: Leifsonia xyli subsp. xyli is a Gram-positive bacterium that causes ratoon stunting disease and affects sugarcane worldwide.
Properties: Presence of flagella: not known
Human pathogen: No
Interaction: Plant pathogen
Number of membranes: 1
Number of inteins:0
Statistics: Number of LEIXX entries in the UniProt Knowledgebase: 2001 (285 in UniProtKB/Swiss-Prot + 1716 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    CTCB07
Genome structure:
Chromosome EMBL accession number AE016822 (circular; 2,584,158 bp) (download entry) (download Genome Reviews).
Reference(s):
[1] PubMed=15305603; [ NCBI , EBI , Israel , Japan ]
Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H., Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. ;
"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli.";
Mol. Plant Microbe Interact. 17:827-836(2004).
Web links:
Official genome site(s):
http://www.leifsonia.lncc.br/lxxsite/index.php
Other web sites:
CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Leifsonia&GLspecies=xyli&GLstrain=CTCB07
Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid281090%5Borgn%5D
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Lxyl_CTCB07
Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Leifsonia_xyli.html
PEDANT: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p212_Lei_xyli
TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntlx01
 EBI Proteome Analysis page



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