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HAMAP: Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) complete proteome

General information

Species:  Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712)
Species code: BEII9
Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia (TaxID: 395963) [NEWT/ NCBI]
Description: Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) was originally known as Azotobacter indicus. It produces a water-soluble extracellular polysaccharide that forms a biopolymer useful for a wide range of applications to textile printing, oil and adhesive industries. This strain belongs to the Beijerinckiaceae family, which includes both methanotrophic (bacteria able to oxidize methane) and nonmethanotrophic species (like Beijerinckia indica subsp. indica). Sequencing of strains from this family presents an ideal opportunity for a comparative genomic study into the evolution and biochemistry of obligate methanotrophy.
Properties: Presence of flagella: No
Interaction: No
Number of membranes: 2
Number of inteins:0
Statistics: Number of BEII9 entries in the UniProt Knowledgebase: 3774 (2 in UniProtKB/Swiss-Prot + 3772 in UniProtKB/TrEMBL)


Genome(s) sequenced

Strain:    ATCC 9039 / DSM 1715 / NCIB 8712
Genome structure
• Chromosome EMBL accession number CP001016 (circular; 4,170,153 bp) (download entry) (download Genome Reviews).
• Plasmid pBIND01 EMBL accession number CP001017 (circular; 181,736 bp) (download entry) (download Genome Reviews).
• Plasmid pBIND02 EMBL accession number CP001018 (circular; 66,727 bp) (download entry) (download Genome Reviews).
References
[1] Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N., Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P. ;
"Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC 9039.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
[2] Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N., Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P. ;
"Complete sequence of plasmid1 of Beijerinckia indica subsp. indica ATCC 9039.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
[3] Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Dunfield P.F., Dedysh S.N., Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P. ;
"Complete sequence of plasmid2 of Beijerinckia indica subsp. indica ATCC 9039.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
Web links
GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bind_ATCC9039
 EBI Proteome Analysis page



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