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Publications in 2001

Journal Articles

1. Gras, R. and Muller, M., Computational aspects of protein identification by mass spectrometry. Curr.Opin.Mol.Ther., 2001. 3(6): p. 526-532.

2. Sanchez, J.C., Chiappe, D., Converset, V., Hoogland, C., Binz, P.A., Paesano, S., Appel, R.D., Wang, S., Sennitt, M., Nolan, A., Cawthorne, M.A., and Hochstrasser, D.F., The mouse SWISS-2D PAGE database: a tool for proteomics study of diabetes and obesity. Proteomics., 2001. 1(1): p. 136-163.

3. Tonella, L., Hoogland, C., Binz, P.A., Appel, R.D., Hochstrasser, D.F., and Sanchez, J.C., New perspectives in the Escherichia coli proteome investigation. Proteomics., 2001. 1(3): p. 409-423.

Guest Edition

1. Palagi, P.M., Sanchez, J.C., and Stöcklin, R., Proceedings of the Swiss Proteomics Society, 2001 Congress, Functional Proteomics 2001, FontisMedia Publishers: Lausanne, Switzerland.

Book Chapters

1. Bienvenut, W.V., Müller, M., Palagi, P.M., Heller, M., Gay, S., Binz, P.A., Giron, M., Gasteiger, E., Jung, E., Gras, R., Sanchez, J.C., Appel, R.D., and Hochstrasser, D.F., Proteomics and mass spectrometry: some aspects and recent developments, in Mass Spectrometry and Genomic Analysis, Housby, N., Editor. 2001, Kluwer Academic Publishers: The Netherland. p. 1-53.

2. Binz, P.A., Gasteiger, E., Sanchez, J.C., Bairoch, A., Hochstrasser, D.F., and Appel, R.D., Proteome Analysis, in Bioinformatics: from Genomes to Drugs, Vol. II: applications, Lengauer, T., Editor. 2001, John Wiley & Sons. p. 69-118.

Abstracts & Posters

1. Appel, R.D. Proteomics in the 3rd Millennium: Is It Possible without HPC? in Teraflop. 2001.

2. Appel, R.D. and Bairoch, A. Proteomics: back to the future. in Congress of the Swiss Proteomics Society. 2001. Geneva.

3. Hernandez, D., Gras, R., and Appel, R. Automated learning of unknown length motifs in unaligned DNA sequences with genetic algorithms. in ISMB2001 - The 9th International Conference on Intelligent Systems for Molecular Biology. 2001. Tivoli Gardens, Copenhagen, Denmark.

4. Hernandez, D., Gras, R., and Appel, R.D. Automated learning of unknown lenght motifs in unaligned biological sequences with genetic algorithm. in Congress of the Swiss Proteomics Society. 2001. Geneva.

5. Hochstrasser, D.F., Sanchez, J.C., and Appel, R.D. Proteomics (and its trends facing nature complexity). in Congress of the Swiss Proteomics Society. 2001. Geneva.

6. Müller, M., Gras, R., and Appel, R. Vizualization and Interpretation of the Molecular Scanner Data. in ISMB2001 - The 9th International Conference on Intelligent Systems for Molecular Biology. 2001. Tivoli Gardens, Copenhagen, Denmark.

7. Müller, M., Gras, R., Bienvenut, W.V., Hochstrasser, D.F., and Appel, R.D. Visualisation and Analysis of Molecular Scanner Peptide Mass Spectra. in Congress of the Swiss Proteomics Society. 2001. Geneva.

8. Palagi, P.M., Appel, R.D., Bairoch, A., Bittar.G, Bucher, P., Chopard, B., Goudet, J., Guex, N., Jongeneel, V., Peitsch, M.C., and Pellegrini, C. A Masters Degree in Bioinformatics in Switzerland. in Workshop on Education in Bioinformatics 2001, ISMB2001 - The 9th International Conference on Intelligent Systems for Molecular Biology. 2001. Tivoli Gardens, Copenhagen, Denmark.

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